KEGG   Arabidopsis thaliana (thale cress): AT3G14550
Entry
AT3G14550         CDS       T00041                                 
Symbol
GGPS3
Name
(RefSeq) geranylgeranyl pyrophosphate synthase 3
  KO
K13789  geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath00900  Terpenoid backbone biosynthesis
ath01100  Metabolic pathways
ath01110  Biosynthesis of secondary metabolites
Module
ath_M00366  C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:ath00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    AT3G14550 (GGPS3)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:ath01006]
    AT3G14550 (GGPS3)
Enzymes [BR:ath01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     AT3G14550 (GGPS3)
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     AT3G14550 (GGPS3)
    2.5.1.29  geranylgeranyl diphosphate synthase
     AT3G14550 (GGPS3)
Prenyltransferases [BR:ath01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   AT3G14550 (GGPS3)
SSDB
Motif
Pfam: polyprenyl_synt Terpene_synth_C
Other DBs
NCBI-GeneID: 820681
NCBI-ProteinID: NP_001326728
TAIR: AT3G14550
UniProt: Q9LUD9 A0A1I9LQ60
Structure
Position
3:complement(4884563..4887487)
AA seq 360 aa
MATTVHLSSFSLFIQSRGRRDNSISSVKSLKKRTGLSPSSALTSQGGRDMIPPEGKCNDH
NSAFDFKLYMIRKAESVNAALDVSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELV
GGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLA
LAFEHMTFVSSGLVAPERMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEF
IHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGK
TAGKDVMAGKLTYPRLIGLERSKEVAEKLRREAEEQLLGFDPSKAAPLVALASYIACRHN
NT seq 1083 nt   +upstreamnt  +downstreamnt
atggctactactgttcatctcagctcattctccctcttcatccaatccagaggaagaaga
gacaactccatatcttccgtcaagagtctcaaaaaacgcacaggtttgtctccctcttct
gccctcacctcacaaggtggcagagacatgattccaccagagggaaaatgcaatgatcac
aactctgcttttgatttcaagttgtatatgatccgcaaagccgaatctgtaaatgcggct
ctcgacgtttctgtaccgctccgagaacccctcactgtccaggaagccgtgcggtactca
ttgctagcgggcggaaaacgtgtgaggcctctgctctgcattgccgtctgcgagcttgtg
ggaggcgacgaggctactgccatgtcagctgcttgcgcggttgagatgatccacacaagc
tctcttattcatgacgatcttccgtgcatggacaatgccgacctccgcagaggcaagccc
accaaccacaaggtatatggagaagacatggcggttttggcaggtgatgcactccttgca
ttggcgtttgagcacatgacgtttgtgtcgagtgggttggtcgctcccgagaggatgatt
cgcgcggtggttgagctggccagggccatagggactacagggctagttgctggacaaatg
atagacctagccagcgaaagactgaatccagacaaggttggattggagcatctagagttc
atccatctccacaaaacggcggcattgttggaggcagcggcggttttaggggttataatg
ggaggtggaacagaggaagagatcgaaaagcttagaaagtatgctaggtgtattggacta
ctgtttcaggtggttgatgacattctcgacgtaacaaaatctactgaggaattgggaaag
actgcaggaaaagacgtaatggctggaaagctgacgtatccaaggctgataggtttggag
agatcaaaggaagttgcagagaaactgaggagagaagcagaggaacaacttctagggttt
gatccaagtaaggcggcgcctctggtggctcttgctagctacatcgcttgcagacacaac
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (6)   
   KEGG ENZYME (3)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
3D Structure (1)   
   PDB (1)   
Protein domain (2)   
   Pfam (2)   
All databases (38)   

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