KEGG   Arabidopsis thaliana (thale cress): AT5G04920
Entry
AT5G04920         CDS       T00041                                 
Name
(RefSeq) EAP30/Vps36 family protein
  KO
K12190  ESCRT-II complex subunit VPS36
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ath00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    AT5G04920
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ath04131]
    AT5G04920
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ath04147]
    AT5G04920
Membrane trafficking [BR:ath04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-II complex
    AT5G04920
Exosome [BR:ath04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   AT5G04920
  Exosomal proteins of colorectal cancer cells
   AT5G04920
SSDB
Motif
Pfam: EAP30 Vps36_ESCRT-II GRAM PH_TFIIH Flagellin_N
Other DBs
NCBI-GeneID: 830374
NCBI-ProteinID: NP_196112
TAIR: AT5G04920
UniProt: Q9FF81 A0A178U8Z1
Position
5:complement(1438959..1442017)
AA seq 440 aa
MASGSSSIAIGGLFENAEVTTSGRPVLRRNEVECFLLSSIDIDSEDDPPRFTALRSGNLI
LTTHRLIWIPSQSNESVPSSIPLSAVTHIYSHKKSIKSMFHSPRIRFQADPGSIVVTIVF
RGKGDFDGFLSKLWECWRGRAWEEEEKSESETSKSGSGTVAQGLYGNDGTVRMVGLAGIL
RKEQEQWESTDKSLQDAFQDLNALMSKAKEMVSLAEKMRQKLLSAPSSQNGSTDDEEMGS
KEEMQQWMLSVGIISPVTKESAGALYHQELSRQLADFVRIPLEKAGGMISLTDMYYHFNR
ARGTELISPDDLWQACTLWEKFDVPVMLRKFDSGVMVIQNKSHSDEEVMSRIRMLVTKTE
TLRVGVTASDAALTLKIAPAMAKEHLLSAETKGLLCRDMSPDGLRFYFNLFPEIDPTNLH
IVKEFGTYGEWIKATSLLSV
NT seq 1323 nt   +upstreamnt  +downstreamnt
atggctagtggaagcagcagcatcgcaatcggtggtttgtttgagaacgcggaggtgact
acgagtggtagaccagtgcttcgtcgcaatgaggtcgaatgtttcctcctctcctccatc
gatatagattccgaagatgatccgccgcgattcacagctttgaggtctggaaatctaatc
cttaccactcatcgtctcatatggattccttctcaatcaaacgaatctgttccttcttcg
attccgctctccgccgttactcacatctattcccataagaaatcaatcaagtctatgttc
cattcgcctagaatccgatttcaagcggatcccggttcgattgttgtaacgattgtgttt
agagggaaaggggattttgatggctttttgtcgaaattgtgggaatgttggagaggtagg
gcatgggaagaagaggagaagagcgagagtgagacttcaaagtcaggatctggaacagtt
gcgcaaggtttgtatggaaacgatggaacggtgaggatggtgggattggctgggattttg
aggaaggagcaagaacagtgggagagcacagataagagcttgcaagatgcttttcaggat
ttgaatgctcttatgagtaaggctaaagagatggtgagtctggcagagaaaatgcggcag
aagcttttgtctgctcctagtagtcagaacggttcaactgatgatgaagaaatggggtcc
aaagaagaaatgcaacagtggatgttgagcgttggtattatctcaccagttacaaaggaa
tctgctggtgcattgtaccaccaagaattgtcccgccagttggcagattttgtcagaatc
ccattagaaaaagctgggggaatgatcagccttactgatatgtattaccacttcaaccga
gctcgtgggacagagttgatttccccagacgatttgtggcaagcttgtaccctctgggag
aaatttgatgttccagtaatgctgcggaagtttgatagcggtgtgatggtcatccaaaac
aagtctcacagcgacgaagaggttatgagtagaatcagaatgcttgtgacaaaaactgaa
actcttagagttggagttactgctagtgatgcagctttgacgctaaagattgctcctgcc
atggctaaggaacatctactatctgcagagaccaaaggtttgctatgtagagacatgagc
ccagatgggcttcgattctatttcaacctgtttcccgagattgatccaaccaatctccat
atagtcaaggagtttgggacatacggtgaatggatcaaagcgaccagtttgttgtctgta
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (2)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (32)   

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