KEGG   Arabidopsis thaliana (thale cress): AT5G16260
Entry
AT5G16260         CDS       T00041                                 
Symbol
ELF9
Name
(RefSeq) RNA binding (RRM/RBD/RNP motifs) family protein
  KO
K13093  HIV Tat-specific factor 1
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ath03041]
    AT5G16260 (ELF9)
Spliceosome [BR:ath03041]
 Complex A
  Other components
   Complex A specific factors
    AT5G16260 (ELF9)
SSDB
Motif
Pfam: RRM_1 GYF_2 RRM_7 GYF DUF6593
Other DBs
NCBI-GeneID: 831486
NCBI-ProteinID: NP_197130
TAIR: AT5G16260
UniProt: Q9LF02 A0A654G1K7
Position
5:5311141..5315834
AA seq 519 aa
MSDSDNLQLPPSSTGATVAATDVGWYILGENQQNLGPYTFSELCNHFRNGYLLETTLVWA
DGRSEWQPLSAIPDLMSRISGAEIAYPAVGSSGLINGSNAGTRQEKQDYTASASTEDEFE
KWQREIKDAEAEAERLKNGSVSGTELVEDDHERASSPPEGEDEFTDDDGTKYKWDRARRV
WVPQDDPPLGSVDPYGLEEMTFAKEDEVFPTINILDTSVDKKDASKDDVAGKKEEDGSDE
TAEINSNGKRKLPEPETEKKEPNKPPDSWFELKVNPHIYVNGLPDDVTIEEVAEVFSKCG
IIKEDDTGKPRIKLYSDKATGKLKGDALISYMKEPSVDLAIKILDGAPLRPADKLLMSVS
RAKFEQKGERFITKQTDNKKKKKLKKVEQKLLGWGGTDDSKVSIPATVVLRYMFSPAELM
ADEDLVAELEEDVKEESLKHGPFDSVKVCEHHPQGVVLVRFKDRRDAQKCIEAMNGRWYA
KRQIHASLDDGSVNHATVRDFDLEAERLDQFAAELEAAE
NT seq 1560 nt   +upstreamnt  +downstreamnt
atgtcagactctgataatctacagcttccaccatcatcgacaggggcaacagttgcagct
actgatgttggttggtacattcttggtgaaaatcagcagaacctgggcccttatactttc
tctgagctatgtaaccatttcaggaatggttacctactagaaactactctagtctgggct
gacggaagaagcgaatggcagccactttctgccatccccgatttaatgtcaaggatatcc
ggagctgagattgcctatccagctgtaggttcatctgggttgataaatggatctaatgct
ggaaccaggcaagagaagcaagattatactgcctctgctagtactgaggatgaatttgag
aaatggcagagagagattaaagacgcagaagcagaggctgaaaggttgaaaaatggttct
gtctctggtactgagcttgttgaagatgatcatgaaagggcatcttcaccacctgagggc
gaagatgagttcacagatgatgatggaacaaaatataaatgggacagagctcgtagagta
tgggttcctcaggacgatccaccactgggtagcgttgacccgtatggactcgaagagatg
acctttgctaaggaagacgaagtatttccaacaattaacattcttgatacttctgttgat
aagaaggatgcctctaaggatgacgtggctggtaagaaagaagaagatggctctgatgaa
accgctgaaataaacagtaacggcaagagaaagctaccagagccagaaactgaaaagaag
gaaccaaacaagcctccagattcgtggtttgagttaaaagtaaacccacatatttatgtt
aatgggttgcccgatgatgtcaccatcgaggaagtagctgaagttttttctaagtgcggt
ataattaaggaggatgacactggcaagcctcgcataaagctatacagtgacaaggcgaca
ggaaaattaaaaggcgatgctcttatctcctatatgaaggagccctcagtggatctggca
attaaaatcttagacggggctccgttacgtcctgctgataagctcctcatgtcagtttct
cgagctaagttcgagcagaaaggggagagatttataactaagcaaaccgacaacaagaag
aaaaagaagcttaaaaaggtcgagcaaaagttgcttggatggggtggtacagatgattct
aaggtctcaatacctgcaacggttgttctgcgctacatgttcagtccagctgagttgatg
gctgatgaggatctggttgctgagttagaggaagacgtgaaagaggagagtttgaagcat
ggaccgttcgactcagtgaaggtatgtgagcatcatccacagggtgttgttcttgtaaga
ttcaaggatcggagagatgcacagaaatgtatagaagcaatgaacggtcgatggtatgca
aagagacagatacatgcgagcctcgatgatggatcagtgaaccatgctacagttagggat
tttgatttggaagcggaacggttagatcagtttgcagctgaactggaagctgctgagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (37)   

Download RDF
DBGET integrated database retrieval system