KEGG   Arabidopsis thaliana (thale cress): AT5G16750
Entry
AT5G16750         CDS       T00041                                 
Symbol
TOZ
Name
(RefSeq) Transducin family protein / WD-40 repeat family protein
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    AT5G16750 (TOZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ath03009]
    AT5G16750 (TOZ)
Ribosome biogenesis [BR:ath03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    AT5G16750 (TOZ)
SSDB
Motif
Pfam: WD40 Utp13 NBCH_WD40 ANAPC4_WD40 Nup160 WD40_like PROPPIN Ge1_WD40 Nbas_N Cytochrom_D1
Other DBs
NCBI-GeneID: 831538
NCBI-ProteinID: NP_568338
TAIR: AT5G16750
UniProt: Q9LFE2
Position
5:complement(5504242..5509361)
AA seq 876 aa
MAPHSLKKNYRCSRSLKQFYGGGPFIVSSDGSFIACACGDVINIVDSTDSSVKSTIEGES
DTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATA
GADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNT
EKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHDYSCKATVATYEVLEAVT
TVSSGTPFASFVASLDQKKSKKKESDSQATYFITVGERGVVRIWKSEGSICLYEQKSSDI
TVSSDDEESKRGFTAAAMLPSDHGLLCVTADQQFFFYSVVENVEETELVLSKRLVGYNEE
IADMKFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIV
TGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGIS
EDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGH
KRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVS
CGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLWHDSTASDK
EDDFRKEEEAILRGQELENAVLDAEYTKAIRLAFELCRPHKVFELFSGLCRKRDSDEQIV
KALQGLEKEEFRLLFEYVREWNTKPKLCHIAQFVLYKTFNILPPTEIVQVKGIGELLEGL
IPYSQRHFSRIDRFVRSSFLLDYTLGEMSVIDPETVETEYPKDEKKKEKDVIAAMEQDTD
ELKQETPSRKRKSQKSKGKSNKKRLIAEAQGSVIAV
NT seq 2631 nt   +upstreamnt  +downstreamnt
atggctcctcattcgttaaagaagaactacaggtgctcacgatctctaaagcagttctac
ggcggtggtcctttcattgtttcatctgatggttctttcatcgcctgcgcctgtggtgac
gtcattaacatcgttgattctacggattcatcagtgaaatccacgattgaaggcgagtcg
gatacgctcactgctttagctcttagtcctgatgataagctccttttctctgctggacat
agtagacaaatccgagtttgggatttggaaaccttgaaatgcattcgctcttggaaggga
cacgaaggacctgtgatgggaatggcttgccacgcatctggaggattgctagctactgct
ggagctgataggaaagttcttgtttgggatgttgatggtggtttctgcactcattatttc
agaggccataaaggggttgtgtcaagtatcctcttccatcctgattcaaacaaaaacatt
cttatctcgggaagtgatgatgcaaccgttcgtgtctgggatcttaatgcaaagaatact
gagaagaaatgtcttgccattatggagaagcacttttcagctgtgacttcaattgctcta
tcagaggatggattgactttattcagtgctggaagagataaagttgtgaacttgtgggac
cttcatgattatagctgcaaggctacagttgcaacgtatgaggtactagaagctgtgaca
acagtttcttctgggacgcctttcgcttcatttgtagcttctttggatcagaagaagagt
aagaagaaggaatctgattctcaagcaacatattttattactgttggtgaacgtggtgtt
gtgcgcatctggaagtctgaaggttcaatttgcctctatgagcaaaagtcgtcggatatt
actgtcagctcggatgatgaggaatctaaaagaggattcactgcagctgctatgctgcct
tctgatcacggactgctttgtgtgactgctgatcagcagttctttttctactccgttgtg
gaaaatgtggaagaaacagagttagtgctaagcaagaggctggttggatataatgaagaa
atagctgatatgaagttcctaggtgatgaagaacagtttctcgcagtagctacaaatctc
gaggaggttcgtgtatatgatgttgcaacaatgtcatgttcctacgtgttagctggccat
aaggaagttgttctgtccctcgacacttgcgtatctagttctgggaatgttctaatcgta
actggaagtaaagacaaaactgtaaggctatggaacgcaacaagcaaatcttgtatcgga
gttggtactggccataatggcgatatcttagcggttgcttttgcgaagaagtccttcagt
ttctttgtcagtggaagtggtgatcgtacactgaaggtctggagccttgatggtatttca
gaggactcagaggagcccattaatctgaaaactagaagtgttgtcgctgcccatgataaa
gacatcaattccgtggctgttgctcgtaacgatagcttagtttgcactggttctgaggat
cgtacagctagcatatggagactaccagacttggtacatgttgttacacttaaaggacac
aagaggcggattttttctgttgagttctcaactgttgatcagtgcgtaatgacagcttca
ggagataagacagtaaagatatgggctatatctgatggttcctgcctcaaaacatttgaa
ggtcatacctcaagtgtacttagggcctcatttataactgatggaacccaatttgtctca
tgtggtgccgatggtttgttgaaactttggaatgtgaacactagcgagtgcattgccaca
tatgaccagcacgaggacaaggtatgggctttagctgttggaaagaagacagaaatgatt
gcaactggtggaggtgatgcagttattaatttatggcatgattcaaccgcttcagataaa
gaagacgatttccgaaaagaggaagaagcaatcttgagaggtcaagagctggaaaacgca
gtgttagatgcggaatacactaaagctataagattagcatttgagctttgtaggcctcac
aaagtttttgagctcttcagtggtctctgcaggaaaagagattcagacgaacagatagtg
aaagctcttcaaggacttgaaaaagaagagttccgtctactttttgaatatgtccgagaa
tggaacacaaaaccaaagctatgccacattgctcagtttgttctttacaaaaccttcaac
atacttcctcccacagaaattgttcaggtaaaaggaattggggaactcctggaagggtta
atcccatatagtcagagacatttcagtagaattgacagatttgtaagaagcagtttcttg
ttagactacacacttggtgagatgtctgtgatcgatccagagactgttgagacagagtat
cctaaggacgagaagaaaaaagaaaaagatgtcattgctgcaatggaacaagacacagac
gagctaaagcaggagactccttcgaggaaacgaaagtctcagaaatccaaaggtaaatcg
aataagaagagactcattgccgaagcacagggaagcgtaattgcagtttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (2)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (44)   

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