KEGG   Arabidopsis thaliana (thale cress): AT5G26180
Entry
AT5G26180         CDS       T00041                                 
Name
(RefSeq) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
  KO
K15264  25S rRNA (cytosine2278-C5)-methyltransferase [EC:2.1.1.311]
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ath03009]
    AT5G26180
Enzymes [BR:ath01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.311  25S rRNA (cytosine2278-C5)-methyltransferase
     AT5G26180
Ribosome biogenesis [BR:ath03009]
 Eukaryotic type
  Other ribosome biogenesis factors
   AT5G26180
SSDB
Motif
Pfam: Methyltr_RsmB-F NSUN5_N NSUN5_fdxn-like Methyltransf_25 Ubie_methyltran Methyltransf_31 PCMT FtsJ TRM Methyltransf_4
Other DBs
NCBI-GeneID: 832687
NCBI-ProteinID: NP_001331921
TAIR: AT5G26180
UniProt: Q8GYE8
Position
5:9149073..9153503
AA seq 567 aa
MVARRNKPKAPLVKHRFSGGDSHKPKPPPATKQPFSGVESHKPKTSPATKQKFSGVESHK
PKTPPGKQRFSGAESRKPKTPPATKQKFSSLERSALYARREAANILRTVLRGDAERRAVA
SIKSLVLSPSVRNKRGTFALVCETLKYLTVIKDVLDIANVLNSKWKRQEPLVFIVCYDIL
FGKDTPSIGDAEKFLMRHKEALLSGLATLLVRKKVDSVDQLLGSKLTGHLKPRYVRVNTL
KMDVDSAVQELEKHYTVQKDETVPDLLVLPPGSDLHAHRLVANGRIFLQGKASSMVAAAL
QPQAGWEVLDACSAPGNKTIHLAALMEGQGKIIACELNEERVKRLEHTIKLSGASNIEVC
HGDFLGLNPKDPSFAKIRAILLDPSCSGSGTITDRLDHLLPSHSEDNNMNYDSMRLHKLA
VFQKKALAHALSFPKVERVVYSTCSIYQIENEDVVSSVLPLASSLGFKLATPFPQWQRRG
LPVFAGSEHLLRMDPVEDKEGFFIALFVRANKLDNPKSSELPDRVCRRRPKERTMQLHPY
LCPKMFRAWSGTLHRLKTRFLLSRNGC
NT seq 1704 nt   +upstreamnt  +downstreamnt
atggtggcgcgtcgtaacaaaccaaaagcgccgctggtgaaacaccgattttccggcggc
gacagtcacaaaccaaaaccaccaccggctactaaacaaccattttccggcgtcgagagc
cacaaaccaaaaacatcaccagctacaaagcaaaagttttccggcgtcgagagtcacaaa
ccaaaaacgccgccgggaaaacaacgattttccggcgccgagagtcgcaaaccaaaaaca
ccaccagctactaagcaaaagttttccagcttagagagatcagctctctacgccagaaga
gaagcagctaatatactccgtaccgttctccgtggtgacgccgagcgacgagccgttgct
tccatcaaatcactcgtcttaagtccttccgttcgcaacaaacgcggcactttcgctctt
gtctgcgagactctcaaatatcttactgtgattaaagatgttcttgatatagctaatgta
ttgaatagtaaatggaagaggcaagagccattggtcttcatcgtttgctacgatatcctc
tttggcaaggatactccatcaattggtgatgcagagaagtttcttatgcggcataaagag
gcgttattgtcaggtttagctacgcttttagtgaggaagaaagtcgatagtgttgatcag
ttgttgggttctaagcttactggtcatttgaaaccacggtatgttcgtgttaatacgctt
aagatggatgtggattctgcagtgcaggagctggagaagcattacacggtgcagaaggac
gagacagttcctgacttgttggtgttgccccctggcagcgatttgcatgctcatcgtttg
gttgcgaatggacgtatatttttgcaggggaaagcaagttcaatggtagcagcagcactg
cagccacaagcaggatgggaggttcttgatgcctgttcagctccaggaaacaaaactatt
catcttgctgctcttatggaaggacaaggaaaaatcatagcatgtgagctaaatgaagaa
cgagttaagcgtttggaacatactataaagctctctggtgcctccaatatcgaagtctgt
catggtgattttttgggcctaaatccgaaagatccttcttttgcgaagattcgggctata
ttgttggatccttcttgctctggctctggcacgattacagatcgtttggaccatctcctt
ccttctcattcagaagataataacatgaactatgactccatgagactgcacaagctcgct
gttttccagaaaaaggctcttgcccatgcactctcctttccaaaggttgagagagtcgta
tacagcacatgctccatctaccaaatagaaaacgaagatgtcgtctcctctgttttacct
ctggcatcatccttgggcttcaaacttgctaccccctttcctcagtggcagcgtcgtggt
ctccctgtatttgcaggatctgaacatctacttaggatggatccggtggaggacaaagaa
gggttcttcatcgctttattcgtcagggcaaacaaactcgataacccaaaatcgtctgaa
cttcccgatagagtgtgtagacgaagacccaaagaaagaaccatgcagttacatccctat
ctttgtcccaaaatgttcagagcttggagtgggaccttgcacaggctcaagactaggttc
ctgttatcacgtaatggttgttga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (2)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (7)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (10)   
   Pfam (10)   
All databases (47)   

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