KEGG   Arabidopsis thaliana (thale cress): AT5G41190
Entry
AT5G41190         CDS       T00041                                 
Name
(RefSeq) RNA-binding NOB1-like protein
  KO
K11883  RNA-binding protein NOB1
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    AT5G41190
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ath03009]
    AT5G41190
   03051 Proteasome [BR:ath03051]
    AT5G41190
Ribosome biogenesis [BR:ath03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    AT5G41190
Proteasome [BR:ath03051]
 Eukaryotic proteasome
  Assembling factors
   Other assembling factors
    AT5G41190
SSDB
Motif
Pfam: PIN_6 NOB1_Zn_bind
Other DBs
NCBI-GeneID: 834121
NCBI-ProteinID: NP_198935
TAIR: AT5G41190
UniProt: Q9FLL1
Position
5:complement(16487466..16490101)
AA seq 602 aa
MDPKPTSMWSSIVKKDPPSKPPVNDGAPAAILGMVGNCKSTKGISIAVVDANAIIEGRQS
LTNFADKFVTVPEVLSEIRDPASRRRLAFIPFTIDTMEPSPESLSKVIKFARATGDLQSL
SDVDLKLIALSYTLEAQVYGTKNLRDVPPPIQTVRVKRLPEKDLPGWGSNVANLEEWEAL
ENETEEKSNANSKILPLKDLNMNIIASDNVSEVGSVVSHTENHEEDVQEGGKKHRRYPPK
KTEIKLEGKMVVEGVDASQGQYDDDDDASDWRPAVSRSTHSKYLRRKARWEHYNALAEQE
IQKDQEADKARHTKEANETHAKDSGKNGEDISSILKDMRLEEESLRALQEETEETNAEAT
LINGEDDIDHDIEVEAEGIDVANQALENLEIASEAEDTFEASSIGDDGSSEQSWSLRALS
ESSVACITGDYAMQNVILQMGLRLLAPGGMQIRQLHRWILKCHACYTVTPEIGRIFCPKC
GNGGTLRKVAVTIGANGAIIAACKPRITLRGTQYSIPMPKGGREAITKNLILREDQLPQK
LLHPRTKKKASKPGDEYFVSDDVFLNHHSDRKAPLQPPVRKAMSVFSQKRNPNDNHYSRS
MH
NT seq 1809 nt   +upstreamnt  +downstreamnt
atggatccgaaaccaacctcgatgtggagctcaattgtgaagaaagatccaccttcaaag
cctccggttaacgacggagctccggcagcgattctcgggatggtcggaaactgcaaatcc
acaaaaggaatatctattgcggttgttgacgccaacgccatcattgaaggacgtcagagc
ttaacaaacttcgccgacaaattcgtaactgtccctgaggttctctctgagattcgtgac
cctgcttctcgccgtcgtctcgctttcatccctttcactattgataccatggaaccttct
cctgaatctctaagtaaagttatcaaatttgcaagagctactggtgatttgcaatctctg
tctgatgttgatctgaagttgattgctttgtcatacacgcttgaggctcaggtttatggc
accaaaaatcttagagatgttcctccaccgattcaaactgttagagttaagagattacct
gagaaggatttacctggttggggctccaatgtggctaacttggaggagtgggaggcactt
gaaaacgagactgaggaaaaatccaacgctaactccaaaatccttccattgaaagacctt
aacatgaatattattgcttcagacaatgtttctgaggttggttctgttgtctctcatact
gagaatcatgaagaggatgtgcaggaaggtgggaagaagcataggcgatacccgcccaag
aaaacagagattaagcttgagggtaagatggtagtggagggagttgatgcatcccagggg
caatatgatgatgatgatgatgctagtgattggagacccgcagtcagtagaagtactcac
tcaaagtatcttagaagaaaggcaaggtgggaacattacaatgctttggctgaacaagaa
attcagaaagatcaagaagctgacaaagctcgacacactaaagaggccaatgaaacccac
gcaaaagatagtggaaagaatggtgaggatatatcttccatccttaaagatatgaggttg
gaggaagagtcattaagggctctccaagaagagactgaagagacgaatgctgaagcaact
ttgatcaatggtgaggatgatattgatcatgatattgaagtcgaagctgaggggatcgat
gttgcaaatcaagcgctagagaacttggagattgctagtgaggctgaggataccttcgag
gcatcatcgattggagatgatggtagcagcgagcagagttggtcattgagagctttatct
gagtccagtgtagcttgtataactggtgactatgcaatgcagaatgttattcttcaaatg
ggtttgcgattgcttgcacccggcggaatgcaaattcgccaactgcataggtggatctta
aaatgccatgcttgctacacagtaactcctgaaattggaagaatcttctgtcccaaatgt
gggaatggtggcactctacgcaaggtagcggttacaataggcgcgaatggcgccatcata
gctgcatgtaaaccacgaattacacttcgagggacccaatattcgataccaatgcctaaa
ggaggaagagaggcaatcaccaagaatctgattctacgggaagatcaactccctcaaaag
cttctccaccctaggaccaagaagaaagcaagcaaaccgggtgatgagtacttcgtatca
gatgatgtgttcttgaaccatcatagtgatagaaaggcgccattgcagcctcctgtgaga
aaagctatgtcggttttcagccagaaaagaaaccctaatgacaaccattactctcgttct
atgcactga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (31)   

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