KEGG   Arabidopsis thaliana (thale cress): AT5G44560
Entry
AT5G44560         CDS       T00041                                 
Symbol
VPS2.2
Name
(RefSeq) SNF7 family protein
  KO
K12191  charged multivesicular body protein 2A
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ath00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    AT5G44560 (VPS2.2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ath04131]
    AT5G44560 (VPS2.2)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ath04147]
    AT5G44560 (VPS2.2)
Membrane trafficking [BR:ath04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    AT5G44560 (VPS2.2)
Exosome [BR:ath04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   AT5G44560 (VPS2.2)
  Exosomal proteins of other body fluids (saliva and urine)
   AT5G44560 (VPS2.2)
  Exosomal proteins of colorectal cancer cells
   AT5G44560 (VPS2.2)
SSDB
Motif
Pfam: Snf7 YlqD DUF4400 Flagellin_C MerR-DNA-bind GAS Cep57_MT_bd
Other DBs
NCBI-GeneID: 834483
NCBI-ProteinID: NP_199269
TAIR: AT5G44560
UniProt: Q0WTY4 A0A5S9YC26
Position
5:17945923..17948400
AA seq 222 aa
MNIFKKKTTPKDALRTSKREMAVATRGIEREITSLQLEEKRLVAEIKKTAKTGNEAATKI
LARQLVRLRQQITNLQGSRAQIRGVTTHTQALYASTSISSGMKGATKAMVAMNKQMAPTK
QAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEEETEDLTNQVLDEIGVGVASQLSS
APKGRIATKTAAPPASTAATNKNSESSEVDELEKRLASLRRI
NT seq 669 nt   +upstreamnt  +downstreamnt
atgaacattttcaagaagaagaccactcccaaagatgctcttcgtactagtaagagagaa
atggctgttgctactcgaggtatcgaacgggagattacatctcttcaactagaggagaag
agactagttgcagaaatcaagaaaacagctaagactggaaatgaggctgccacaaagatt
ttagctcgtcaacttgttcgattgaggcaacagattaccaacttacaaggaagccgtgct
cagattaggggtgtaacaactcatacacaggctctgtatgccagcacttcgatttcatct
ggtatgaaaggtgctaccaaagctatggttgcaatgaacaagcaaatggcaccaacgaaa
caagccaaggtgattaaagatttccaaaagcagtcggcacagctagacatgacgatagag
atgatgtcagaggcaattgatgaaacacttgacaaagatgaggctgaagaagaaacagaa
gatctcactaaccaggttcttgatgagattggtgttggtgttgcatctcagttatcttca
gctccaaaaggtcggattgctacgaaaaccgcagctcctcccgcttccactgcagctact
aacaagaactctgaatcaagtgaagtggatgagcttgagaagaggttggcttcgctacga
cgaatctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (7)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (7)   
   Pfam (7)   
All databases (33)   

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