KEGG   Arabidopsis thaliana (thale cress): AT5G55840
Entry
AT5G55840         CDS       T00041                                 
Name
(RefSeq) PPR superfamily protein
  KO
K17964  leucine-rich PPR motif-containing protein, mitochondrial
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:ath03029]
    AT5G55840
Mitochondrial biogenesis [BR:ath03029]
 Mitochondrial quality control factors
  Mitochondrial respiratory chain complex assembly factors
   Complex-IV assembly factors
    AT5G55840
SSDB
Motif
Pfam: PPR_2 PPR_1 PPR PPR_3 PPR_long MRP-S27
Other DBs
NCBI-GeneID: 835678
NCBI-ProteinID: NP_001331239
TAIR: AT5G55840
UniProt: Q9LVQ5
Position
5:22597993..22602760
AA seq 1096 aa
MCLTKDLNLLGSYETGFDMEKSIYNILTIDRWGSLNHMDYRQARLRLVHGKLALKFLKWV
VKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGALMTTYRLCN
SNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSF
LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK
KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT
YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME
AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD
EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI
YNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL
PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF
LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR
KGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIV
TTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSI
ILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEI
NWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGL
INGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKL
VPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFE
LYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFITSMSLSQDSHRNL
KMAMEKLKALQSNKKD
NT seq 3291 nt   +upstreamnt  +downstreamnt
atgtgtttgactaaagatttgaacttgttggggagttatgaaacaggatttgatatggag
aagagcatatacaacattcttacaattgaccgttggggatctctaaatcatatggattat
aggcaggctcgtcttagactggttcatgggaagctggctttgaagtttcttaaatgggta
gtgaagcagcctggtttggagactgaccatattgttcagttggtctgtattactacacat
atactagttagagctagaatgtatgacccagcaagacacatcttaaaagagttatctttg
atgagtggtaaatcaagctttgtttttggtgctttgatgaccacgtaccgtctttgcaat
tcaaacccttctgtttacgacatcttgattagagtgtacttgagggaaggaatgattcaa
gattctctggaaatatttcgcttgatgggtctttatggattcaacccttctgtatatact
tgtaatgcaatactaggttccgttgtaaagagtggtgaagatgtgtcagtctggtctttc
ttgaaggaaatgcttaagaggaagatttgtcccgatgtggctaccttcaatatactaatt
aatgtgctctgtgctgaaggaagctttgaaaagtcgtcttatcttatgcaaaagatggag
aagagtggttatgcgccaactatagttacatacaatactgtgttacattggtattgtaaa
aagggaagatttaaagctgctattgagcttctagatcacatgaagtcgaaaggggtcgac
gctgatgtctgtacttataatatgcttatccatgatttgtgcagaagcaatagaattgcc
aaaggttatttgttgctgagggatatgaggaagaggatgattcaccccaacgaagtcacg
tacaatacacttattaacgggttttctaatgaaggaaaggtgctcattgctagtcaactt
ttgaacgagatgttaagctttggactttccccgaatcatgttactttcaatgctttgatt
gatggacacattagtgagggaaactttaaagaggctttgaagatgttttatatgatggaa
gcaaaaggtcttacaccttctgaagttagttatggtgtacttttagatgggttgtgcaag
aatgcagagtttgacctagcaagaggcttttacatgagaatgaagagaaatggggtatgt
gttgggcgaataacatacactggaatgattgatgggttatgcaaaaatgggtttctggat
gaggcagttgttctgcttaatgaaatgagcaaagatggtattgatcctgatattgtcaca
tactctgctcttataaatggattttgcaaggtggggaggtttaaaactgcgaaggagata
gtatgtagaatttaccgagttggtcttagtccaaatggcatcatctactcaaccctgata
tacaattgttgtaggatgggatgcttaaaggaagcaataagaatttatgaagctatgatc
cttgaggggcatactcgagaccatttcacgttcaatgtacttgttacttcactgtgtaaa
gctggtaaagtggctgaggcagaagaatttatgcgttgcatgacaagtgatggtattctt
cctaacactgttagctttgattgtcttatcaatgggtatggaaactcaggtgaagggcta
aaagcgttctctgtatttgatgagatgaccaaagttggtcatcacccaacattcttcaca
tatggtagtctcctcaagggattatgcaaaggtgggcatttaagagaggcagagaagttt
ttgaaaagcctccatgctgttcctgcagctgttgatactgtaatgtacaacacactactc
actgcaatgtgtaaatcagggaacttggccaaggctgtctcactttttggtgagatggtg
caacgaagcattctgcctgacagttatacatatactagtcttatttctggattgtgtagg
aagggcaagactgttattgccatactctttgctaaggaagctgaagctcgaggtaatgta
cttccgaacaaagtgatgtatacctgttttgtggatggtatgttcaaggctggccagtgg
aaagctggtatttattttcgggagcaaatggataaccttggccatacccctgatattgtc
acaacaaatgcaatgatagacggttactcaaggatggggaaaatagagaagacaaatgac
ctacttcccgaaatggggaaccaaaatgggggtcctaatctgactacctacaatattctc
ttgcatggatattcaaagaggaaagatgtatccacaagctttctgctgtatagatccatc
atactgaacggcattttacctgacaagctcacatgccattctcttgttctcggaatttgt
gaatccaacatgttggagattggtcttaaaatcttgaaagcattcatatgccgaggtgtt
gaagttgacaggtatacgttcaacatgctaatctccaagtgttgtgcaaatggagaaatc
aactgggcatttgatttggttaaagtcatgacctctctcggaatctcgcttgacaaagat
acttgtgacgccatggtaagtgtcctcaacaggaaccacagattccaggagtctcgcatg
gttttgcacgaaatgtcgaagcaagggatatctcccgagagtaggaagtacattggtctg
attaacggactttgtagagtgggagatataaagactgcgtttgtggtgaaggaagagatg
atagcacataagatatgtccgcctaatgtagctgagagtgcaatggtaagagcgcttgca
aaatgcggtaaggctgacgaagccacgctgcttcttcggtttatgctgaaaatgaagttg
gttccgactattgctagtttcactactctaatgcacttgtgttgcaagaacggtaatgtt
atagaggccctggaattgagagtcgtcatgagcaattgtgggctgaagcttgatcttgtg
tcatacaatgttttgattactggactttgcgccaaaggtgatatggcacttgcatttgaa
ctctatgaagagatgaaaggagatggatttttagccaatgcgactacatacaaagctctc
atcagggggttacttgcccgggaaacagcattctccggggctgatattatcttgaaagat
ttacttgcaagaggattcataacatctatgagcttgtcacaagattcacacagaaacttg
aaaatggccatggagaagctgaaggccttgcaaagtaacaagaaggattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (6)   
   Pfam (6)   
All databases (46)   

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