KEGG   Arabidopsis thaliana (thale cress): AT5G63540
Entry
AT5G63540         CDS       T00041                                 
Symbol
RMI1
Name
(RefSeq) recQ-mediated instability protein (DUF1767)
  KO
K10990  RecQ-mediated genome instability protein 1
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ath03400]
    AT5G63540 (RMI1)
DNA repair and recombination proteins [BR:ath03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Bloom's syndrome complex (BTR)
     AT5G63540 (RMI1)
   FA (Fanconi anemia) pathway
     AT5G63540 (RMI1)
SSDB
Motif
Pfam: RMI1_C RMI1_N_C RMI1_N_N
Other DBs
NCBI-GeneID: 836473
NCBI-ProteinID: NP_201159
TAIR: AT5G63540
UniProt: Q5XUX6
Position
5:complement(25440783..25444471)
AA seq 644 aa
MRRRRLQLRYSSDEEEEDETGTSGVGDSVQSFGIASSIQPETSVSSNSNPNPGERIAISE
VEIIDVFGNPQPTPPDSSIPTPYPVYPSESVSGNDYESPISEVLSRMGIKLKREWWVSCL
SGLETSIPQFSYLDVAAKAKHCFEQFMFFDMNLCGGGVLPPNVASMNRIELAGPFVLQVD
EIVNIGCPLKGRYENANAGLKRCLKLSMTDGVQRVFGMEYRPIKDLQVLAPAGLKIVVSS
VQVRHGLLMLVPEIVEVLGGMVEELEEARKRLVVEVNKPPRGKRTRVGVVPSLTTRATLA
AWSLNGNDTGNHVHDTGNHVNSSASGNASHTQANQGIPVHVTRTHNSSRAMDEPLASTNV
GATVSRVEHMQIDTASAHGERTFSDIHSTSSNIHRAASTAGTGTSCSGACSGARSFANNV
GGNSLDQTSNVTSFVEEMHIDTGRVRDTTTHIYGSDSGGVAAEFSNMVVDLEGPSVLSTN
TEKPFTYLAELSQKWAVMKDTIHFVQGRIKCFLTGVKKFQFKQQSTYELLCYVDDGSLIC
EILLHNDVVQKRIGHSSMEVTAALSSSAPTSLNAMMKEKLKRFQLFLADFEGIMVVEMNR
SSQYPVAIEMNQGCSLTDARLLLDRIKSSSRTSSSLNPVVVLSP
NT seq 1935 nt   +upstreamnt  +downstreamnt
atgcgtagacggcgcctgcaactccggtactcctccgacgaagaagaagaagatgaaact
ggaacaagcggagttggtgattctgttcagagctttggtattgcttcatctatacaaccg
gaaacctcagtatcgtcgaattctaaccctaatcccggtgagagaatcgctatatcggaa
gttgagattatcgacgtttttggtaatccccagcctacaccgccggattctagtattcct
acaccgtatccggtttatccgtcggagtcagtgagcggcaatgactatgaatcgccgatc
agtgaggttctttctcgaatggggattaaattgaagagggagtggtgggtatcttgtctt
tcaggacttgaaacttcaattccacaattttcctacctcgatgttgcagctaaagctaag
cattgcttcgagcagtttatgtttttcgatatgaatttatgcggaggtggtgttcttcct
ccgaacgttgcgtctatgaatcgtatagaactcgctggtccgtttgttctgcaggttgat
gagattgttaacattggctgcccactcaaagggaggtatgagaatgctaatgcagggctt
aagaggtgccttaagctgtctatgacagatggtgttcaacgcgtttttggtatggaatac
aggcctattaaagatcttcaagtcttggctcctgctggtttaaagattgttgtatctagt
gtacaagttcggcatgggcttttaatgctagtacctgagattgtagaagttttaggaggg
atggttgaagaactagaagaagcacgaaagcgtctggttgttgaagtaaacaaacctcca
agaggaaaaagaacaagggtaggagtggttccttctttaacaaccagagcaactctagct
gcgtggtcgctaaatggcaatgatactggtaatcatgtacatgatactggtaatcatgta
aatagttctgcctcgggcaatgctagtcacactcaagccaatcaaggcatacccgtacat
gtaacgagaactcacaatagttcacgggcgatggatgaacctcttgcttctaccaatgtg
ggagctactgtttcaagggttgagcatatgcagattgatactgcttctgcgcacggggaa
agaacgttttctgatatacattcaacttctagtaacattcaccgagcagcatccacagct
ggtactggtactagctgcagtggtgcctgcagtggtgcaagatcttttgccaacaacgtt
ggcggaaattcattggatcaaacatctaacgtgacttcatttgttgaagaaatgcatatt
gacactggtcgtgtaagggatacaacgactcatatatatggttcagattcaggcggtgta
gcagcagaattcagtaatatggttgtcgatttggaaggcccttctgtgctgtctacaaat
acagagaaacctttcacatacttagccgagttgtctcaaaaatgggcagttatgaaagat
accatacattttgttcaaggaaggatcaagtgctttctaactggagtgaagaaattccag
ttcaagcaacagtctacgtatgagcttctatgctatgttgatgatggtagtctcatctgt
gagattttgctccataacgacgttgtacaaaaaaggataggacattcatccatggaagtc
acagctgctctttcctcgtcagctccaacatcactaaatgccatgatgaaagagaaactg
aaacgcttccagttgtttctcgctgactttgagggaataatggtggtagaaatgaacaga
tcgtcgcaatatccagtagctatcgaaatgaatcagggatgttcgctaaccgatgctcgg
ttactcttggacagaatcaaatcttcttcaagaacatcctcaagcttaaatccagttgtt
gttctgtccccttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (28)   

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