KEGG   Arabidopsis thaliana (thale cress): AT5G22110
Entry
AT5G22110         CDS       T00041                                 
Symbol
DPB2
Name
(RefSeq) DNA polymerase epsilon subunit B2
  KO
K02325  DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03030  DNA replication
ath03410  Base excision repair
ath03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AT5G22110 (DPB2)
   03410 Base excision repair
    AT5G22110 (DPB2)
   03420 Nucleotide excision repair
    AT5G22110 (DPB2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ath03032]
    AT5G22110 (DPB2)
   03400 DNA repair and recombination proteins [BR:ath03400]
    AT5G22110 (DPB2)
Enzymes [BR:ath01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AT5G22110 (DPB2)
DNA replication proteins [BR:ath03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    AT5G22110 (DPB2)
DNA repair and recombination proteins [BR:ath03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      AT5G22110 (DPB2)
SSDB
Motif
Pfam: DNA_pol_E_B
Other DBs
NCBI-GeneID: 832272
NCBI-ProteinID: NP_680197
TAIR: AT5G22110
UniProt: Q500V9
Position
5:complement(7330825..7334282)
AA seq 526 aa
MSSTSQKRKKIQKKFKNRGYNLKFDALDEILVFADQFPDDDDGEAIDLLLDNLQETHKSS
TVDAESVRGLINRLLGAHNAPEEPTTSASSLAIIDAFLVPKFGYDSVKKKFNEHTSSLPI
HGEASAKTALYRERFMLLSQRVSRAEHFSRPAFDAEMSQFENNEISSIQSLISQRGRKWV
MGVISQLEDGHFYLEDLSASVEIDLSKAKITTGFFTENTIILAEGEMQVNGIFQVITCGF
PPLEDRDKTLKAHSEYDFFGGGTLTKEEMIKLADLERQAVNDTFVILSDIWLDDEEVMRK
LETVLDGFESVETVPSLFVFMGNFCSRPCNLSFGSYSSLREQFGKLGRMIGNHPRLKENS
RFLFIPGPEDAGPSTVLPRCALPKYLTEELRNIIPNAIFSSNPCRVKFYNQEIVFFRQDL
LYRMRRSCLVTPSSEETNDPFKHLVYTITHQSHLCPLPLMVQPIIWNYDHALRLYPTPHT
IVLGDKSEQEVCKFGGTTCFNPGSFSTDSTFVAYRPSTQEVELSAL
NT seq 1581 nt   +upstreamnt  +downstreamnt
atgagcagcaccagtcagaagaggaagaagatacagaagaaattcaaaaacagagggtac
aacctcaaattcgatgccttagacgagattctcgttttcgccgatcaatttcccgacgac
gatgacggagaagctatagatcttctcctcgataacctccaggaaacgcataaatcatcc
actgtcgacgcggaatcagttcgaggattgataaatcgcttgttaggagctcataacgcc
ccggaggaacctacaacatctgcttcttccttggcgatcatcgacgcgtttctggtgcca
aagtttggatatgattctgttaaaaaaaagttcaacgagcatacgagtagcttgcctatt
cacggtgaggcttctgcaaaaacagctttatacagggaacgattcatgttgttgtcgcag
agagtttctcgtgcagagcatttttctaggccagcatttgatgctgaaatgtcgcagttt
gagaacaatgagatatcttcaatccagtctctgatttctcaaaggggaaggaaatgggtg
atgggagtgatatcacagttggaagatggacatttctacctggaagacctttcagcttct
gtagagattgatctgtccaaagcaaagataacaacaggattcttcacagagaatactata
attttggcagaaggcgaaatgcaggttaacggtatctttcaggtgattacatgtggattt
cctcccttagaagacagggacaaaacactaaaggcgcattctgaatatgatttcttcgga
ggcggcacactaactaaagaagagatgattaaacttgcagaccttgaaagacaagcggtg
aatgacacatttgtcatattgtctgacatatggttggacgacgaagaggttatgaggaag
ctggaaactgttcttgacggttttgaaagtgtggagacagtaccctccttgtttgttttt
atgggaaatttttgttctcgcccatgcaacttatcctttggttcgtattcaagccttagg
gagcagtttggtaaacttgggagaatgattggaaaccatccacggcttaaagaaaatagt
cggtttttattcattccaggtcctgaggacgcaggtccctcaacagtcttgccaagatgc
gctttaccgaaatatttaaccgaagagcttcgaaacattattcccaatgcaatattttca
agcaatccttgcagagtaaagttctataaccaagagattgtgttcttccgacaagatctt
ctgtatcggatgcgtcgttcatgcttagtaaccccttcctcagaagaaacgaatgaccct
tttaagcatcttgtctacacaataactcatcagagccatctatgtcctctacctctcatg
gtgcaacccatcatttggaactacgatcacgctcttcgactgtacccaactcctcatacg
atagtattaggtgacaagagtgagcaagaggtttgcaaatttgggggaacaacatgtttc
aatccaggctctttctcaactgatagcacattcgtagcttatcgaccttccactcaagaa
gtcgaactctctgctttgtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (37)   

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