KEGG   Arabidopsis thaliana (thale cress): AT4G36480
Entry
AT4G36480         CDS       T00041                                 
Symbol
LCB1
Name
(RefSeq) long-chain base1
  KO
K00654  serine palmitoyltransferase [EC:2.3.1.50]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath00600  Sphingolipid metabolism
ath01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ath00001]
 09100 Metabolism
  09103 Lipid metabolism
   00600 Sphingolipid metabolism
    AT4G36480 (LCB1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:ath01007]
    AT4G36480 (LCB1)
Enzymes [BR:ath01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.1  Transferring groups other than aminoacyl groups
    2.3.1.50  serine C-palmitoyltransferase
     AT4G36480 (LCB1)
Amino acid related enzymes [BR:ath01007]
 Aminotransferase (transaminase)
  Class II
   AT4G36480 (LCB1)
SSDB
Motif
Pfam: Aminotran_1_2 RELT OKR_DC_1 Cys_Met_Meta_PP
Other DBs
NCBI-GeneID: 829800
NCBI-ProteinID: NP_568005
TAIR: AT4G36480
UniProt: Q94IB8 A0A178UY56
Structure
Position
4:17217909..17221625
AA seq 482 aa
MASNLVEMFNAALNWVTMILESPSARVVLFGVPIRGHFFVEGLLGVVIIILLTRKSYKPP
KRPLTEQEIDELCDEWVPEPLIPPITEDMKHEPPVLESAAGPHTTVNGKDVVNFASANYL
GLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCETRISKFLGTPDSILYSYGLS
TMFSTIPCFCKKGDVIVADEGVHWGIQNGLQLSRSTIVYFKHNDMESLRITLEKIMTKYK
RSKNLRRYIVAEAVYQNSGQIAPLDEIVKLKEKYRFRVILDESNSFGVLGRSGRGLAEHH
SVPIEKIDVVTAAMGHALATEGGFCTGNARIIDYQRLSSSGYVFSASLPPYLASAAITAI
DVIDQNPDMLVKLKQNVALLWKGLSDIKGMSLTSNRESPIVFLKLEKSSGSAKDDLLLLE
KMADRALKEDSLLVVSSKRSFLDKCRLPVGIKLYVSAGHSESDLLKASESLKRLASELLL
KS
NT seq 1449 nt   +upstreamnt  +downstreamnt
atggcttcgaatctcgtggaaatgtttaatgctgctttgaattgggttactatgattctg
gagagtccttcagctagagttgtcttgtttggtgtcccaatccgagggcacttctttgtg
gaagggttgttgggtgttgtcattatcattctcctcactcggaagagttataaacctccc
aagcgaccattgaccgagcaggaaatagatgagttgtgtgatgagtgggttcctgaacct
cttataccgccaattactgaagacatgaagcatgagccaccagttcttgaaagtgctgct
ggaccgcatacaacagttaatggaaaagatgtggtgaattttgcctcagctaattatctt
gggctcattggccacgagaagttgctggaatcatgtacttctgcattagaaaaatatggg
gtcggttcttgtgggcctcgtggattctatggtacaattgatgtccaccttgactgcgaa
accagaatatccaaatttttgggtactcctgattcaatcctttactcttatggactttcc
acaatgttcagcacaattccttgtttctgtaagaaaggcgatgtcattgttgctgatgag
ggtgttcactggggaatacaaaatggacttcagctttcaagaagtacaattgtgtacttc
aagcacaatgacatggaatcccttcgaattacccttgagaaaatcatgacaaagtacaag
cgctcaaagaacttgaggcgttatattgtagctgaagctgtatatcaaaattcaggtcaa
attgcgcctctggatgagattgtaaaactaaaagagaagtatcggtttcgtgttatattg
gatgaaagcaactcttttggtgtgcttggccgttctgggagaggtcttgcagagcatcat
agtgtccctattgagaagatagatgttgtgactgctgcaatgggccatgcattagccaca
gaaggtggattttgcactgggaatgcccgcatcatcgattaccagagacttagcagttca
ggatatgtgttctctgcttctttaccaccataccttgcaagtgctgctatcaccgccatt
gatgtcattgatcaaaaccctgatatgttagttaagctgaagcaaaatgttgctctgtta
tggaaaggattgtcagatatcaaggggatgtcattaacaagcaaccgggaatcacctatt
gttttcttaaaattagagaaatctagcggttcagctaaagatgatttgcttctacttgag
aaaatggctgaccgtgctctgaaggaagactcattgttggttgtgagttctaaaagatca
tttcttgataaatgccggttacctgtgggaatcaaactctacgtctcagcgggacattcg
gaatccgatcttcttaaagcgtcggagtcactgaagagacttgcttcagagcttctactc
aagtcctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (2)   
   KEGG MODULE (2)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (2)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
3D Structure (1)   
   PDB (1)   
Protein domain (4)   
   Pfam (4)   
All databases (50)   

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