KEGG   Arabidopsis thaliana (thale cress): AT3G57660
Entry
AT3G57660         CDS       T00041                                 
Symbol
NRPA1
Name
(RefSeq) nuclear RNA polymerase A1
  KO
K02999  DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    AT3G57660 (NRPA1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ath03021]
    AT3G57660 (NRPA1)
Enzymes [BR:ath01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     AT3G57660 (NRPA1)
Transcription machinery [BR:ath03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     AT3G57660 (NRPA1)
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_1 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 CIS_TMP
Other DBs
NCBI-GeneID: 824935
NCBI-ProteinID: NP_191325
TAIR: AT3G57660
UniProt: Q9SVY0
Position
3:21353497..21363201
AA seq 1670 aa
MAHAQTTEVCLSFHRSLLFPMGASQVVESVRFSFMTEQDVRKHSFLKVTSPILHDNVGNP
FPGGLYDLKLGPKDDKQACNSCGQLKLACPGHCGHIELVFPIYHPLLFNLLFNFLQRACF
FCHHFMAKPEDVERAVSQLKLIIKGDIVSAKQLESNTPTKSKSSDESCESVVTTDSSEEC
EDSDVEDQRWTSLQFAEVTAVLKNFMRLSSKSCSRCKGINPKLEKPMFGWVRMRAMKDSD
VGANVIRGLKLKKSTSSVENPDGFDDSGIDALSEVEDGDKETREKSTEVAAEFEEHNSKR
DLLPSEVRNILKHLWQNEHEFCSFIGDLWQSGSEKIDYSMFFLESVLVPPTKFRPPTTGG
DSVMEHPQTVGLNKVIESNNILGNACTNKLDQSKVIFRWRNLQESVNVLFDSKTATVQSQ
RDSSGICQLLEKKEGLFRQKMMGKRVNHACRSVISPDPYIAVNDIGIPPCFALKLTYPER
VTPWNVEKLREAIINGPDIHPGATHYSDKSSTMKLPSTEKARRAIARKLLSSRGATTELG
KTCDINFEGKTVHRHMRDGDIVLVNRQPTLHKPSLMAHKVRVLKGEKTLRLHYANCSTYN
ADFDGDEMNVHFPQDEISRAEAYNIVNANNQYARPSNGEPLRALIQDHIVSSVLLTKRDT
FLDKDHFNQLLFSSGVTDMVLSTFSGRSGKKVMVSASDAELLTVTPAILKPVPLWTGKQV
ITAVLNQITKGHPPFTVEKATKLPVDFFKCRSREVKPNSGDLTKKKEIDESWKQNLNEDK
LHIRKNEFVCGVIDKAQFADYGLVHTVHELYGSNAAGNLLSVFSRLFTVFLQTHGFTCGV
DDLIILKDMDEERTKQLQECENVGERVLRKTFGIDVDVQIDPQDMRSRIERILYEDGESA
LASLDRSIVNYLNQCSSKGVMNDLLSDGLLKTPGRNCISLMTISGAKGSKVNFQQISSHL
GQQDLEGKRVPRMVSGKTLPCFHPWDWSPRAGGFISDRFLSGLRPQEYYFHCMAGREGLV
DTAVKTSRSGYLQRCLMKNLESLKVNYDCTVRDADGSIIQFQYGEDGVDVHRSSFIEKFK
ELTINQDMVLQKCSEDMLSGASSYISDLPISLKKGAEKFVEAMPMNERIASKFVRQEELL
KLVKSKFFASLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILM
TAAANIKTPIMTCPLLKGKTKEDANDITDRLRKITVADIIKSMELSVVPYTVYENEVCSI
HKLKINLYKPEHYPKHTDITEEDWEETMRAVFLRKLEDAIETHMKMLHRIRGIHNDVTGP
IAGNETDNDDSVSGKQNEDDGDDDGEGTEVDDLGSDAQKQKKQETDEMDYEENSEDETNE
PSSISGVEDPEMDSENEDTEVSKEDTPEPQEESMEPQKEVKGVKNVKEQSKKKRRKFVRA
KSDRHIFVKGEGEKFEVHFKFATDDPHILLAQIAQQTAQKVYIQNSGKIERCTVANCGDP
QVIYHGDNPKERREISNDEKKASPALHASGVDFPALWEFQDKLDVRYLYSNSIHDMLNIF
GVEAARETIIREINHVFKSYGISVSIRHLNLIADYMTFSGGYRPMSRMGGIAESTSPFCR
MTFETATKFIVQAATYGEKDTLETPSARICLGLPALSGTGCFDLMQRVEL
NT seq 5013 nt   +upstreamnt  +downstreamnt
atggctcacgctcaaaccacagaggtgtgtttgagttttcaccgctctttattgtttccc
atgggagcttcccaggtggtcgaatctgttagattcagtttcatgacagagcaagatgtt
cgaaagcatagtttcctgaaagttaccagtcctattttacacgataacgtgggcaatcct
tttcctggtggtctctatgatcttaaattaggtcctaaagatgataagcaagcttgcaat
tcatgtggtcagctcaaacttgcttgtccaggacattgtggtcatatcgagcttgtcttt
cctatttaccatcctttgctcttcaatcttcttttcaatttcttgcagagggcctgtttc
ttctgtcatcactttatggcaaaaccggaagatgttgaaagagctgtttctcagctgaaa
ctcatcattaaaggtgatatagtttccgcgaagcaattggagtccaacactcccactaag
tctaagtctagtgatgaaagctgtgaatcagttgtaaccactgattcatccgaagaatgt
gaagattctgacgtggaagatcagagatggacatctcttcagtttgctgaagtcactgct
gtcttgaagaattttatgaggttgtcatcaaagtcgtgtagtagatgcaaaggaattaat
cctaaactcgagaagcctatgttcggatgggttcgcatgagagcaatgaaagactccgat
gttggagctaatgtcattcgagggcttaagctaaagaagtccactagcagtgttgaaaat
ccagatggctttgatgatagtggcattgatgcattatcagaagttgaagatggtgataaa
gagacaagagaaaagtccacggaagtagctgcagagtttgaagagcataattctaaaaga
gaccttttaccgagtgaggtcaggaatatcttaaaacatctgtggcagaatgagcacgag
ttttgctccttcattggtgatctttggcagagtgggtctgaaaaaattgactactctatg
ttttttttggagagtgttcttgtgccccctactaaatttagacctccaacaacaggaggt
gatagtgttatggaacatcctcaaaccgtaggactaaataaggtcatagaatccaataat
atactcgggaatgcctgtactaacaaattagatcagtcgaaggtaattttcagatggagg
aatcttcaagaatcagtcaatgtcttgtttgatagcaaaactgccacagttcaaagccag
agagacagctctggaatatgtcaattgctggagaagaaagaggggctatttcggcaaaaa
atgatgggaaagagagtgaatcatgcgtgcagatctgtgatatctccagatccttatatc
gctgttaatgacatcggaattcctccttgttttgctttgaaattgacgtatcccgagagg
gtgactccttggaatgtggagaagttaagggaagctatcattaatggtcctgacattcat
cctggagctacacattactctgacaaatcatctacaatgaagttgccctctaccgaaaaa
gcacgaagggcaattgcaagaaaattactgtcctcacgaggagccactacagaacttggg
aaaacttgtgatatcaactttgaaggtaaaactgtccatcgacatatgcgagatggtgac
atcgtccttgtgaatcgtcagccaacattacataaacctagcttaatggcgcacaaggtc
cgtgttctgaagggggagaaaacacttcgtctccactatgcaaattgcagtacatacaat
gcagattttgatggtgatgagatgaatgtgcattttccacaagatgagatttcacgtgct
gaggcctacaatattgtcaatgctaacaaccaatatgctaggccttctaatggcgagcca
cttcgagctttaattcaggatcatattgtcagttccgttttgcttactaaaagggacaca
tttttggacaaagatcattttaatcagcttctcttcagttccggtgtcactgacatggta
ctcagtactttttctggaagatctggcaagaaagtcatggtatcagcttctgatgcagaa
ctgttgacagtcacgcctgctattttgaagccagtgcctctttggactgggaagcaggtc
atcactgcagtgttgaatcagataaccaaaggtcacccgcctttcaccgtagagaaagct
accaaacttccagttgatttcttcaaatgtagatctagagaagtaaaacctaacagtgga
gatttgaccaaaaagaaagagattgacgagtcatggaaacagaatcttaatgaagataaa
ttgcacatcagaaaaaatgaattcgtctgcggtgtgatcgacaaggctcagtttgctgac
tatgggctggttcatacagtgcatgagctttatggttcaaatgctgcaggaaatctgctc
tctgtttttagtcgtctctttacagtctttcttcagacccacggtttcacctgtggcgtt
gatgatcttattattttaaaagatatggatgaagagaggacgaagcaacttcaagaatgt
gaaaatgttggtgaaagagtactccgtaaaacctttggcatagatgttgatgttcagata
gatcctcaggacatgagatccagaatagaacgaattctttatgaggacggggaatctgct
ttggcatctttggacaggagcatcgtaaattatctcaaccagtgttcaagcaagggtgtg
atgaacgatttactgtctgatgggttactaaaaacacctggaaggaattgtatatcgcta
atgacgatatctggggctaagggcagtaaggttaacttccagcaaatctcttcacacctt
ggccagcaagatttagaaggaaaaagagttccccgaatggtttctgggaagacattacct
tgtttccatccatgggactggtcccctagagctgggggatttattagtgacagattccta
agtggtcttcgcccccaagaatattacttccattgcatggctggacgagaagggttagtt
gatactgcagtgaagacatcgcgtagtgggtatctgcaaagatgcttgatgaaaaatctt
gagagtcttaaagtcaactatgattgtactgtccgggatgctgatgggtccatcattcag
ttccaatatggtgaagatggtgtggatgttcatcggtctagcttcattgaaaagttcaaa
gaactgacaataaatcaagatatggtccttcaaaaatgcagtgaagacatgctatctgga
gctagtagttacatcagtgatctgcctattagtcttaagaagggagctgagaagtttgta
gaggcaatgcctatgaatgaacgtattgcttctaaatttgtgagacaagaagaactactg
aagctggtgaagtcaaaattctttgcaagtcttgcgcagccaggggagcctgtaggtgta
cttgctgctcaatctgtaggagagccatcaacacagatgacgttgaatactttccatctt
gctggacgtggagagatgaatgtgacacttggaattccacgtttacaagagattttgatg
acagctgcagcaaacattaagacaccaataatgacatgcccgttgctgaaaggcaaaaca
aaggaggatgcaaatgatattactgataggttgaggaagataacggtggcagatataata
aagagcatggaactgtcagttgtaccatatacggtttatgagaatgaagtttgtagtatt
cacaagcttaagataaatctctataagccagagcattatccgaagcacaccgatatcact
gaagaagactgggaagagacgatgagggctgtatttttaaggaagttggaggacgctata
gagacccacatgaaaatgctccatagaataaggggcatacacaatgatgtcacaggtcca
atagctggaaatgaaactgataatgatgattctgtaagtggaaagcagaatgaagatgat
ggtgatgatgatggcgagggtacagaagttgatgatcttggttcagatgcacagaaacag
aagaaacaagaaacagatgagatggattatgaggaaaactctgaagatgagacgaacgaa
ccatcttcaatcagtggagtagaggaccctgagatggatagtgagaatgaggacacagaa
gttagcaaggaagatactccggaaccgcaggaagagtctatggaacctcaaaaagaggta
aaaggggtaaagaatgtcaaagaacagagtaaaaaaaagagacggaaatttgttcgagct
aaaagtgacagacatatctttgtgaaaggtgaaggagagaaatttgaggtccatttcaag
tttgctacagatgaccctcatattttacttgcccagattgctcaacaaacggcgcagaag
gtttacatccagaattctgggaagattgaacgatgcacagtggctaattgtggtgatcct
caggtgatctaccatggagacaatccaaaggagagaagagaaatatccaacgatgaaaag
aaagcctcaccagctctccacgcatcaggagttgatttccctgcactgtgggaattccaa
gataaacttgacgtcaggtacttgtatagcaacagcattcacgatatgctcaacattttt
ggagttgaagcagctagagaaacaataatcagggaaataaaccacgtcttcaaatcatat
ggcatttctgtaagcatcagacacttgaacctcattgcagattatatgaccttttccggt
ggataccgaccaatgagccgtatgggaggaattgcagaatcaacttcaccattctgcaga
atgacttttgaaacagccactaagttcattgtccaagcagctacttatggagaaaaggac
acattagaaaccccctctgctagaatctgtcttggcttgcctgcgctttcaggaactgga
tgcttcgatttgatgcagagagtggagctctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   RefGene (30)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (54)   

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