KEGG   Arabidopsis thaliana (thale cress): AT4G17300
Entry
AT4G17300         CDS       T00041                                 
Symbol
NS1
Name
(RefSeq) Class II aminoacyl-tRNA and biotin synthetases superfamily protein
  KO
K01893  asparaginyl-tRNA synthetase [EC:6.1.1.22]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    AT4G17300 (NS1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:ath01007]
    AT4G17300 (NS1)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ath03016]
    AT4G17300 (NS1)
Enzymes [BR:ath01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.22  asparagine---tRNA ligase
     AT4G17300 (NS1)
Amino acid related enzymes [BR:ath01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   AT4G17300 (NS1)
Transfer RNA biogenesis [BR:ath03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    AT4G17300 (NS1)
 Prokaryotic type
    AT4G17300 (NS1)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d
Other DBs
NCBI-GeneID: 827443
NCBI-ProteinID: NP_193462
TAIR: AT4G17300
UniProt: O48593
Position
4:9681348..9684984
AA seq 567 aa
MAATFLPATSLRLTQNSTLRFLSFFTISNPSYSLFRPLRRRVLPPFDAFPANSRRRCFCT
AVSESLGSGDGNKVESYEKRFGSKVGEFRKKLRIAEVKGGADEGLSRVGQSLNIMGWVRT
LRSQSSVTFIEINDGSCLSNLQCVMTSDAEGYDQVESGSILTGASVSVQGTIVASQGTKQ
KVELKVEKIIVVGECDSSYPIQKKRVSREFLRTKAHLRPRTNTFGAVARVRNTLAYATHK
FFQESGFVWVASPIITASDCEGAGEQFCVTTLIPSSHENTDTSIDAIPKTKGGLIDWSQD
FFGKPAFLTVSGQLNGETYATALSDVYTFGPTFRAENSNTSRHLAEFWMIEPELAFADLD
DDMACATAYLQYVVKYVLDNCKEDMEFFDTWIEKGIIRRLSDVAEKEFLQLGYTDAIEIL
LKANKKFDFPVKWGLDLQSEHERYITEEAFGGRPVIIRDYPKEIKAFYMRENDDGKTVAA
MDMLVPRIGELIGGSQREERLEVLEARLDELKLNKESYWWYLDLRRYGSVPHAGFGLGFE
RLVQFVTGIDNIRDVIPFPRTPASAEF
NT seq 1704 nt   +upstreamnt  +downstreamnt
atggcggccacgtttctgccggcgacatctctccgtctaactcaaaactctactctccgc
ttcttatcattcttcaccatttctaacccttcttattctctcttccgtcctctacgccgc
cgtgttctccctcccttcgatgcttttccggccaattctcgccggagatgcttttgcaca
gctgtttcggaatctctcggctccggtgatggaaataaagttgagagttacgagaaacga
tttgggagtaaagttggagaattcaggaaaaagttgaggatagctgaagtgaaaggagga
gcggacgaaggactgagtcgggtcgggcagagccttaacattatgggttgggttcgtaca
cttcgatctcagagcagtgtcacattcattgagataaatgatggttcatgcttatcgaat
ttgcaatgtgtgatgacttcggatgcagaagggtatgatcaggtagaatctggttcgatc
ttgactggagcatcagtatctgtacaaggtactattgtagctagccagggaacgaagcaa
aaagtggaacttaaggtggagaaaatcattgtggttggagagtgtgactcttcctatccg
atccagaagaaaagggtcagccgggaattcttgagaaccaaggctcatttacgtcctaga
accaacacttttggggcggtggcaagagttaggaatactctggcatatgctacacacaag
ttctttcaagaaagtggatttgtctgggtggcaagcccaattatcacagcttcggattgt
gaaggagcaggagaacagttctgtgtcactacacttattcctagctcccatgagaacacc
gatacttccattgatgcgattccgaaaacaaagggagggttgatcgattggtctcaggac
ttttttgggaaaccagcattcttaaccgtctctgggcaacttaatggagaaacttatgca
accgctctctcagatgtatacacatttggtcctacatttcgagctgagaattccaacacg
tcaaggcacttagccgaattctggatgattgaaccagaacttgcttttgccgacctggat
gatgacatggcctgtgccactgcctacctccagtacgtagtaaagtacgttcttgataat
tgcaaggaagacatggagtttttcgatacatggattgagaaaggaatcattcgccgcttg
agtgacgtagctgagaaagagtttctacagctggggtacacagacgccattgaaattctt
ctgaaagcaaacaaaaaattcgattttccggtgaagtgggggctggatctgcagagtgag
catgaaaggtacataacagaagaggcttttgggggtcgacctgtgataataagagactat
ccgaaggagatcaaagcattctatatgcgggagaacgatgatgggaagacagtggcagca
atggatatgcttgtgcctcggataggagagctgataggtggaagccaaagagaggaaagg
cttgaggtgttggaagcgaggcttgatgagttgaaactcaacaaagagagctactggtgg
tacctcgacctccgccgctatggttcagttcctcatgcaggatttggactagggtttgag
agactggtccaatttgtcaccggaattgataatatcagagacgttattcctttcccgcgc
acacctgcctctgctgaattctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (48)   

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