KEGG   Arabidopsis thaliana (thale cress): AT1G17980
Entry
AT1G17980         CDS       T00041                                 
Symbol
PAPS1
Name
(RefSeq) poly(A) polymerase 1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    AT1G17980 (PAPS1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ath03019]
    AT1G17980 (PAPS1)
Enzymes [BR:ath01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     AT1G17980 (PAPS1)
Messenger RNA biogenesis [BR:ath03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     AT1G17980 (PAPS1)
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 Capsid_VP7
Other DBs
NCBI-GeneID: 838378
NCBI-ProteinID: NP_173240
TAIR: AT1G17980
UniProt: Q9LMT2 A0A178W197
Position
1:complement(6187465..6191708)
AA seq 713 aa
MASVQQNGQRFGVSEPISMGGPTEFDVIKTRELEKHLQDVGLYESKEEAVRREEVLGILD
QIVKTWIKTISRAKGLNDQLLHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREGD
FFGELQRMLSEMPEVTELHPVPDAHVPLMGFKLNGVSIDLLYAQLPLWVIPEDLDLSQDS
ILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGIN
WALLVARICQLYPNALPNILVSRFFRVFYQWNWPNAIFLCSPDEGSLGLQVWDPRINPKD
RLHIMPIITPAYPCMNSSYNVSESTLRIMKGEFQRGNEICEAMESNKADWDTLFEPFAFF
EAYKNYLQIDISAANVDDLRKWKGWVESRLRQLTLKIERHFKMLHCHPHPHDFQDTSRPL
HCSYFMGLQRKQGVPAAEGEQFDIRRTVEEFKHTVNAYTLWIPGMEISVGHIKRRSLPNF
VFPGGVRPSHTSKGTWDSNRRSEHRNSSTSSAPAATTTTTEMSSESKAGSNSPVDGKKRK
WGDSETLTDQPRNSKHIAVSVPVENCEGGSPNPSVGSICSSPMKDYCTNGKSEPISKDPP
ENVVAFSKDPPESLPIEKIATPQAHETEELEESFDFGNQVIEQISHKVAVLSATATIPPF
EATSNGSPFPYEAVEELEVLPTRQPDAAHRPSVQQRKPIIKLSFTSLGKTNGK
NT seq 2142 nt   +upstreamnt  +downstreamnt
atggctagtgtccagcaaaatgggcaacggtttggcgtttcagaacctatctctatggga
ggaccaacggagtttgatgtgatcaagacaagagagctcgagaagcacttgcaagatgtt
ggattgtacgagagcaaggaggaagctgttagaagggaggaggttctggggatactagat
cagattgtaaaaacatggattaaaacaatcagccgcgccaaagggttgaatgatcagctg
cttcatgaggcgaatgcaaagatatttactttcggttcttatcgactaggggtacatgga
cctggtgctgatatagacactttatgtgtgggacctagacatgcaactagagaaggtgat
ttctttggtgagctacaaagaatgctgtcagaaatgccggaagtaactgaactgcaccct
gtgcctgatgctcatgttccattgatgggattcaaacttaatggagtttctatagatctc
ctttatgcacaacttccactctgggttatacctgaggacttagatttatcacaggactcc
attctacagaatgctgatgagcaaactgttcgaagtctcaacggttgtagagttactgac
caaatcttgcgtctggttccaaacattcagaatttcagaacaacattaagatgcatgaga
ttttgggccaaacgacgtggagtatactctaatgtctcgggatttcttggtggtataaac
tgggcattgcttgtagctcggatatgtcaactttatcctaacgccctccctaatatttta
gtgtctcggttctttagggtcttctatcaatggaattggccgaacgccatttttctttgt
tctccggatgaaggatcccttggtcttcaagtttgggatcctagaataaacccaaaggat
cggttgcatataatgcccatcattactcctgcttatccttgtatgaactctagttacaat
gtctctgaaagtacattgcggattatgaaaggagagtttcagagaggaaacgaaatatgt
gaggctatggaatcaaacaaagctgactgggataccctttttgagccatttgcattcttt
gaagcgtataaaaactatctacagatagacatttctgctgcaaatgtcgatgatctaaga
aaatggaaaggctgggttgagtcacgcctccgccagctcacactgaagatcgagagacat
tttaaaatgcttcattgccaccctcatccccatgattttcaagacacatcccggccactc
cattgctcttacttcatgggtctgcaacgtaaacaaggagttccagcagcagaaggcgag
caattcgatatcagaagaaccgttgaggagtttaaacacactgtcaacgcttacacattg
tggattccagggatggagattagtgttggccatataaaacggagaagcttacctaatttt
gtgtttcctggtggagttagaccttcacatacctctaaaggaacatgggacagcaatcgc
cgttcagagcacagaaattcttctacatcaagtgcaccagctgctactaccactactacc
gaaatgagttctgaaagtaaagctggttctaacagtccagttgatgggaagaagagaaaa
tggggagatagtgaaacactcaccgatcagccaaggaactctaaacacattgctgtttca
gtgcctgtagagaattgtgaaggcgggagtccaaatccatctgttggatcaatttgttca
agtcctatgaaagattattgtacaaacggtaaatctgagcctattagtaaggatccacca
gaaaatgttgttgctttcagtaaggatccaccagagagtcttccgatagaaaagatagcc
actcctcaagctcatgaaactgaggagcttgaagaaagttttgattttggaaaccaagtg
attgagcagatatctcataaagttgcagtcctgtctgctactgcaactatacctccattc
gaagctacttcaaatggctctcctttcccttatgaagcagtggaagaacttgaggttctt
cccacgcgacagcccgatgcggcacatagaccttcagtacaacagcgaaaaccgataatc
aaattgagcttcacgtctctaggcaaaaccaatggcaagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (38)   

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