KEGG   Arabidopsis thaliana (thale cress): AT1G23820
Entry
AT1G23820         CDS       T00041                                 
Symbol
SPDS1
Name
(RefSeq) spermidine synthase
  KO
K00797  spermidine synthase [EC:2.5.1.16]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath00270  Cysteine and methionine metabolism
ath00330  Arginine and proline metabolism
ath00480  Glutathione metabolism
ath01100  Metabolic pathways
Module
ath_M00034  Methionine salvage pathway
Brite
KEGG Orthology (KO) [BR:ath00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    AT1G23820 (SPDS1)
   00330 Arginine and proline metabolism
    AT1G23820 (SPDS1)
  09106 Metabolism of other amino acids
   00480 Glutathione metabolism
    AT1G23820 (SPDS1)
Enzymes [BR:ath01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.16  spermidine synthase
     AT1G23820 (SPDS1)
SSDB
Motif
Pfam: Spermine_synth Spermine_synt_N Methyltransf_25 Methyltransf_30 MTS Methyltransf_11 Methyltransf_12 Methyltransf_4
Other DBs
NCBI-GeneID: 838993
NCBI-ProteinID: NP_173794
TAIR: AT1G23820
UniProt: Q9ZUB3 A0A178W1L5
Structure
Position
1:8420265..8422985
AA seq 334 aa
MDAKETSATDLKRPREEDDNGGAATMETENGDQKKEPACFSTVIPGWFSEMSPMWPGEAH
SLKVEKVLFQGKSDYQDVIVFQSATYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPN
PKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI
GDGVAFLKNAAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWL
HMDIIEDIVSNCREIFKGSVNYAWTSVPTYPSGVIGFMLCSTEGPDVDFKHPLNPIDESS
SKSNGPLKFYNAEIHSAAFCLPSFAKKVIESKAN
NT seq 1005 nt   +upstreamnt  +downstreamnt
atggacgctaaagaaacctctgccaccgatttgaaaagaccgagagaagaggatgataac
ggcggcgccgctaccatggagacggagaacggagatcagaaaaaggaacctgcttgtttc
tccactgttattcctgggtggttctctgaaatgagtcctatgtggccaggagaggcacac
tcattgaaggttgagaaagttttgtttcaagggaaatcagattatcaggatgttattgtt
ttccagtctgcaacatatggaaaagttttggttttggatggagtaatccaacttacggag
agagatgaatgtgcttatcaggaaatgatcactcatcttcctttgtgttctatccctaac
cctaagaaggttttggtcattggaggaggagatggaggtgtcctgcgggaagttgcacgc
catgcttctattgagcagattgacatgtgtgaaattgataaaatggtggtcgacgtgtct
aagcaatttttccctgatgtagcaattggatatgaggatcctcgcgtgaaccttgtcatt
ggcgatggtgttgctttcttgaagaatgctgctgaaggatcatacgatgcagttattgtt
gactcttcagatccaatcggtcctgcaaaggagctgtttgagaaacccttcttccaatct
gtggctagagctcttcgtcctggtggagttgtgtgcactcaagctgaaagcttgtggctt
cacatggacatcatcgaagacattgtttccaactgccgtgagatcttcaagggttctgtg
aactatgcttggaccagcgttccaacataccccagtggggtcattggatttatgctttgt
tcaactgaaggacctgatgttgacttcaaacacccactgaacccaattgacgagagctcc
agcaaatcaaatggacctttgaagttttacaatgccgagattcattcagctgcattctgc
ttgccttctttcgccaagaaggtcattgagtcaaaagccaattga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
3D Structure (4)   
   PDB (4)   
Protein domain (8)   
   Pfam (8)   
All databases (47)   

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