KEGG   Amborella trichopoda: 18432531
Entry
18432531          CDS       T02990                                 
Name
(RefSeq) cyclin-H1-1
  KO
K06634  cyclin H
Organism
atr  Amborella trichopoda
Pathway
atr03022  Basal transcription factors
atr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:atr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    18432531
  09124 Replication and repair
   03420 Nucleotide excision repair
    18432531
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:atr03021]
    18432531
   03400 DNA repair and recombination proteins [BR:atr03400]
    18432531
Transcription machinery [BR:atr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     18432531
DNA repair and recombination proteins [BR:atr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     18432531
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N TFIIB YfhE
Other DBs
NCBI-GeneID: 18432531
NCBI-ProteinID: XP_011622757
Position
Unknown
AA seq 333 aa
MADFQSSTHRERWMFTPQALIEKCHAANQRALRTLEKYGSTRLEVDIDGSLSYPKPQTNA
RENGDGRHAIPEPLNPNEEKLMRIFYEQKIQEVCGAFGFPHKIQATAIIYFKRFYLNWSV
MEHDPKHIMLTCIYTSCKVEEFHVSAEELGKGIQQDHEVILNNEMIVLKSLGFDLIVYAP
YRSVDGFLNDMEDFSHALDDGKLKALGEATKLEVDKTMLTDAPLLFPPGQLALAALRRSN
EVHKVLDFKRYLESLCSQQNGAHTSHELTKCLSAIDSVVSTLKIPEAKDMRHVDRKLKFC
RNPSLQDETKKREKKSKHKSKRTLSQMQEVPPP
NT seq 1002 nt   +upstreamnt  +downstreamnt
atggccgattttcaaagctcaactcatcgcgagaggtggatgttcaccccacaagctctg
atagaaaaatgccatgcagcaaatcagagagctctaaggacacttgaaaagtatggctct
acacggttggaagttgatattgacgggtcgttgtcctatcctaaaccacaaactaatgca
agagaaaatggtgatggaaggcatgcaattccagaaccacttaatcctaatgaggagaaa
cttatgcgaatcttttatgagcaaaaaattcaagaagtttgtggagcttttggattcccc
cataagatccaggctacagccatcatatactttaaaaggttttatttgaactggtcggta
atggagcatgatccaaaacatataatgctaacttgcatatatacatcatgtaaggttgaa
gaattccatgtatcagcagaggagcttggcaaggggattcaacaagaccatgaagtgatt
ctcaataatgagatgattgttcttaagagtttgggatttgatcttattgtttacgcgcca
taccgatcggttgatggttttctcaacgatatggaggatttcagccatgcgttggatgat
gggaagcttaaggctttgggggaagctaccaagctggaagttgacaaaacaatgctcact
gatgctcctcttcttttccctcctgggcagttagcactggctgctctccggagatcaaat
gaggtacacaaagttctcgatttcaagagatacttggagagtctttgctctcagcaaaat
ggtgcgcatactagtcacgagctaaccaaatgcctgagtgccattgattctgtggtgagt
acacttaaaatccctgaagcgaaggatatgaggcatgtagaccggaagctaaagttttgc
aggaatccgagcttgcaggatgagaccaaaaagcgtgaaaagaaatcaaaacacaagtcc
aaaagaactttgagccagatgcaagaagttcctccgccttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

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