KEGG   Amborella trichopoda: 18434139
Entry
18434139          CDS       T02990                                 
Name
(RefSeq) ABC transporter B family member 20 isoform X1
  KO
K05658  ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2]
Organism
atr  Amborella trichopoda
Pathway
atr02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:atr00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    18434139
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:atr02000]
    18434139
   04147 Exosome [BR:atr04147]
    18434139
   04090 CD molecules [BR:atr04090]
    18434139
Enzymes [BR:atr01000]
 7. Translocases
  7.6  Catalysing the translocation of other compounds
   7.6.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.6.2.2  ABC-type xenobiotic transporter
     18434139
Transporters [BR:atr02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB1, 4, 5 subgroups
    18434139
Exosome [BR:atr04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   18434139
CD molecules [BR:atr04090]
 Proteins
  18434139
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N AAA_29 AAA_21 AAA_15 AAA_23 AAA_22 AAA_16 Zeta_toxin RsgA_GTPase AAA_30 DUF87
Other DBs
NCBI-GeneID: 18434139
NCBI-ProteinID: XP_006844278
Position
Unknown
AA seq 1401 aa
MMISRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDSNAEAVQVEEEGGMEEAEEMEPPP
AAVPFSRLFAFADGFDWLLMVVGSLAAAAHGTALVVYLHFFGKIVNLLGLQNLPSDELLH
EFNKHVLYIIYIASGVFAAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYGNN
GDIVSQVLSDLLLIQSALSEKVGNYIHNMATFFGGLVIGMVNSWQIALLTLGSGPFIVAA
GAISNIFLHRLAENIQDAYAEAAGIAEQAIAYIRTLYAFSNETLAKYSYATSLQATLRYG
ILISLVQGLGLGFTYGLAICSCALQLWVGRHLISHGKANGGEIITALFSVILSGLGLNQA
ATNFYSFEQGRIAAYRLYEMISRSTSSIIQEGNILSSVQGNIEFRNVYFSYLSRPEIPIL
SGFYLTVPAKKTVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKSLKLEWLRSQI
GLVTQEPALLSLSIRDNIAYGRTATLDQIEEAAKTAHAHTFISSLPKGYDTQVGRAGLAL
SEEQKIKLSVARAVLSNPSILLLDEVTGALDFEAERAVQEALDILMLGRSTIIIARRLSL
IRNADYIAVMEEGQLVEMGTHDELLHVDGLYAELLRYEEAAKLPKRTPIRSYKETATFQI
EKDSSASHSFQESTSPKMAKSPSLQRMPGVNSVRQMDTSYNSLESPKAHSPPSEQMLENG
MPSEALEKVPSIKRQDSFEMKLPALPKIDVHAVQQQASTTSDPESPISPLLTSDPKNERS
HSKTFSRPLMESDELPTEEKTPDASKTQKPPSLWRLAELSFAEWLYALLGSVGAAIFGSF
NPLLAYILAQIVAAYYRDRGHHLRYEVNKWCLVIACMGVVTVVANFLQHFYFGIMGEKMT
ERVRRMMFSAMLRNEVGWFDDEENSADTLSMRLANDATFVRAAFSNRLSIFIQDISAIFV
AVLIGMLLEWRLALVALATLPVLTVSAVAQKMWLAGFSRGIQEMHRKASLVLEDAVRNIY
TVVSFCAGNKVMELYRLQLTKIFTMSFLHGMAIGFGFGFSQFLLFACNALLLYYTALTIK
KDHATLSTALKEYMVFSFATFALVEPFGLAPYILKRRKSLTSVFEIIDRVPKIDPDDSSG
LKPPNVYGSLELKNIDFCYPTRPEVMVLSNFSLKVSGGQTVAIVGASGSGKSTIIALIER
FYDPTAGQVLLDGRDLTLFNVRWLRSHLGLVQQEPVMFSTTIKENILYARHNASEAEVKE
AARIANAHHFISSLPHGYDTPVGVVRGGVELTPGQRQRIAIARVVLKNAPILLVDEASSA
IESESSRVVQEALDTLVMGNKTTVLIAHRAAMMRHVDSIVVLNAGRIVEQGTHDLLMAAN
GLYVRLMQPHMAKRLRQHRLI
NT seq 4206 nt   +upstreamnt  +downstreamnt
atgatgatatcaaggggtctatttgggtggtcaccacctcatatccagcctctaacccct
gtctcggaagtctcggaaccacccgagtcaccatctccttacctcgattcgaatgcggag
gcagttcaggtcgaagaagagggaggaatggaggaagcggaggagatggagccaccgcca
gctgctgtgcctttctctcgcctcttcgcgtttgcagatggctttgattggttgctaatg
gtggtgggatctcttgctgctgctgcccatggaactgcgctggttgtttacttgcatttc
tttggaaagattgttaatctccttgggttgcaaaacttgccctcagatgaactgttgcat
gagttcaacaagcatgttctgtacattatttacattgcttcaggcgttttcgcagctgga
tggatagaggtctcctgctggattctcactggagagaggcaaactgcagtcatcagatca
aaatatgttcaagtcttactaaaccaggacatgagttttttcgatacatatggaaacaat
ggggacattgtgagtcaagtgctgagtgatttgctgcttattcagtctgctttaagtgag
aaagtggggaactatattcataacatggcaacgttttttggtggtctggttattgggatg
gttaacagctggcaaattgctctcctgacattaggatctggtccatttattgttgctgcg
ggggcaatttctaacatatttcttcacaggctagctgagaacatacaagatgcatatgct
gaggctgctggcattgcagagcaggcaatcgcttacataaggaccttatatgcattctca
aatgagaccctggcaaaatattcatacgcgacttctctccaagcaacactgagatatggc
atattaataagccttgtacaaggccttggacttggctttacatacgggctcgcaatatgt
tcatgtgccttgcaactttgggttggaaggcatttgatttcccatggaaaagccaatggc
ggagaaattattacagctctcttttctgtaatcttaagtggccttggcctgaatcaagca
gctacaaacttctattcattcgagcaagggaggattgctgcttacagactttatgagatg
atcagccgttcaacttctagcattatccaagaggggaacatcttatcttctgtgcaaggg
aacattgagttccggaatgtgtattttagctatctctctcgtccagaaatccccatctta
agtggattttacttaactgtgcctgcaaagaaaactgtggcactggtgggcaggaatggt
tcaggaaaaagcagcataattcctctcatggagcgtttctatgaccctactttaggagag
gtccttttggatggggagaacatcaaaagccttaaattagaatggttgagaagccaaata
gggctggttacgcaagaacctgccttgcttagtttgagcatcagagataatattgcttat
ggtcgtacggctacccttgatcagattgaagaggcagcaaagacagcccatgcacataca
tttatcagctctcttcccaaaggatacgatactcaagtcggtcgagcaggtttggcattg
tctgaggagcagaagatcaaactctctgtggctagggcagttctttcaaatccctctatt
cttcttcttgatgaagttactggtgctcttgattttgaggcagaaagggcagttcaagag
gctcttgatatcctcatgttgggaagatcaactattatcattgctcggcgacttagcttg
attcggaatgctgattacatagcagtgatggaagagggtcaacttgttgaaatgggtaca
catgatgagttactgcatgttgatggcctatatgctgagcttcttagatatgaagaagct
gcgaagcttcctaaaagaacaccaataaggagctacaaggagacagcaactttccaaatt
gaaaaggactcatctgctagccacagcttccaagaatcaacttcacctaagatggccaaa
tctccgtcacttcaaaggatgcctggtgtgaattctgtgaggcagatggataccagctac
aactcactggaatcacctaaagctcatagtccaccatctgaacaaatgttggaaaatgga
atgccatcagaagcactagaaaaagtaccctccataaaaaggcaagacagctttgaaatg
aagttacctgcactaccgaaaattgatgtccatgcagtgcaacaacaagcgtcaaccacc
tccgaccctgagtcacctatttcaccacttttaacatctgatccaaaaaatgagcgctct
cactcaaagacttttagtcgacctcttatggagtctgatgagttgcccacagaagagaaa
acccctgatgcttcaaaaactcagaaacctccttcattatggaggcttgctgagctcagt
tttgctgagtggctttatgctctcctaggaagtgttggtgctgccatttttggttcattt
aatccccttcttgcttacattcttgcccagatagtggctgcatattacagggacaggggt
catcacctacgctatgaggttaataaatggtgcttggttatagcatgtatgggtgttgtc
actgtggttgccaactttttgcaacatttctactttggtataatgggggagaaaatgaca
gaaagggttaggagaatgatgttttcagcgatgctacgaaatgaggttggctggtttgat
gatgaagagaacagtgcagacactttgtccatgcgcctagcgaatgatgctacatttgtt
cgtgctgctttcagcaatcggctttctatatttatccaggatatttcagctatttttgtt
gctgttcttattggaatgctgctggagtggcggttagctcttgttgctttagcaacctta
ccagttttaacagtctctgctgttgctcagaaaatgtggcttgctggcttctcaagaggc
atacaggagatgcataggaaggcatctctggtcctcgaggatgcagtccgaaacatctac
actgtagtttctttttgtgcgggcaacaaggtcatggagctctacaggctacagttaacc
aagatattcactatgagcttccttcatggcatggccatcgggtttggttttggtttctcc
cagttcctcctctttgcatgcaatgccctcctcctctattacactgccctcaccataaaa
aaagaccatgctactctctccacagctctcaaagaatacatggtcttctcttttgcaaca
tttgcattagtcgagccatttgggcttgcaccgtacattctcaagcgtcgcaaatctctc
acatcagtctttgaaatcatagaccgagtacccaaaatcgaccctgatgacagtagtggg
ttgaaacctcccaatgtatatggaagccttgaactcaaaaacattgacttctgctaccca
acaaggcctgaagtaatggtgcttagcaacttcagcctcaaagtcagcggtggccaaact
gtagccatagtcggggcgtccgggtccgggaaaagcaccattatagccttaattgaaaga
ttttacgacccaacagcagggcaagttttattagatggtagggatctcacgctcttcaat
gtaagatggctcaggagccatttaggattggttcaacaagagccagttatgttctcaaca
accataaaagaaaacatcctttatgcccggcataatgcaagtgaagctgaagtgaaggag
gcagcgagaatagcaaatgcccaccactttataagtagcttgcctcatggttatgatacg
cctgttggggtcgtgcgtggtggggttgaattgacgccagggcaaaggcagaggattgca
attgcacgagttgtgctgaagaatgctccaatattgcttgtggacgaggcaagctcggcc
atcgagtcagagtcaagtagggttgtgcaagaggcccttgatacattggtcatgggaaac
aaaaccacggttttgattgcgcaccgtgctgcaatgatgcgacatgttgatagcatcgtg
gtcttgaatgcagggcgcattgttgagcaggggacccacgacttgcttatggcagccaat
gggttgtatgtgaggctcatgcagccacacatggccaagagattacggcaacataggctc
atctaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (13)   
   Pfam (13)   
All databases (41)   

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