KEGG   Amborella trichopoda: 18442468
Entry
18442468          CDS       T02990                                 
Name
(RefSeq) tubulin alpha chain
  KO
K07374  tubulin alpha
Organism
atr  Amborella trichopoda
Pathway
atr04145  Phagosome
atr04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:atr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    18442468
  09142 Cell motility
   04814 Motor proteins
    18442468
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atr03019]
    18442468
   03036 Chromosome and associated proteins [BR:atr03036]
    18442468
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:atr04812]
    18442468
   04147 Exosome [BR:atr04147]
    18442468
Messenger RNA biogenesis [BR:atr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     18442468
Chromosome and associated proteins [BR:atr03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     18442468
Cytoskeleton proteins [BR:atr04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    18442468
Exosome [BR:atr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   18442468
  Exosomal proteins of other body fluids (saliva and urine)
   18442468
  Exosomal proteins of colorectal cancer cells
   18442468
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 18442468
NCBI-ProteinID: XP_006852746
UniProt: U5D1H7
Position
Unknown
AA seq 451 aa
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA
SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP
TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAESAEGEDGDEGDEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgagagagtgcatctccattcacattggccaggccggtattcaggttggcaatgcatgt
tgggaactttactgccttgagcatggcatccagcctgatggtcagatgccaagtgacaag
accgttggaggaggagatgatgctttcaacacattcttcagtgagactggtgctggaaag
catgtccctcgtgctgtgtttgtagatctagaacctacagtcattgatgaagtgaggact
ggaacttatcgccagctcttccaccctgaacaactcatcagtggcaaagaggatgctgcc
aacaactttgctcgtggccactacacaattggtaaagagattgtggatctctgtcttgat
cgcatccgcaagctagctgacaactgcactggtctccagggcttcctggtgttcaatgct
gttggaggtggtactggttctggtcttggctctcttctccttgaacgcctctctgtggac
tatggcaagaagtcaaagctcggcttcactgtctatccttcacctcaggtctccacatct
gttgtggagccttacaacagtgtgctctctacccactccctcttggagcacactgatgtt
gctgtgctcctggacaatgaggctatttatgacatttgccggcgctcccttgatatcgag
cgtcctacctacaccaaccttaaccgccttgtctctcaggtcatttcatcccttactgca
tccctccgattcgatggagccctgaacgtggatgtgactgagttccagaccaacctggtt
ccctaccctcgcatccatttcatgttgtcgtcttatgccccagtaatctctgctgagaag
gcataccacgaacagctctctgtggctgagatcactaacagtgcatttgagccttcctct
atgatggccaagtgtgacccacgccatggcaaatacatggcctgctgcctcatgtatcga
ggtgatgtcgttcccaaagacgtcaatgcagctgttgctaccatcaaaacaaagaggacc
attcaattcgttgattggtgcccgactggtttcaagtgtggtatcaattaccagcctccc
actgttgttcctggaggtgatttggccaaggttcagagagcagtgtgcatgatctccaac
tccacaagtgtggctgaggtgttttccagaatcgaccacaagtttgatctcatgtatgca
aagagggcttttgtgcattggtatgtgggtgagggaatggaagagggtgagttctctgag
gcgagggaggatctggcagcacttgagaaggattatgaagaggtgggtgccgagtcagcc
gagggcgaggatggagatgagggggatgagtattga

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (892)   
   KEGG ORTHOLOGY (1)   
   RefGene (888)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (906)   

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