KEGG   Aegilops tauschii (wheat D): 109749200
Entry
109749200         CDS       T04345                                 
Name
(RefSeq) polyadenylate-binding protein 5-like
  KO
K13126  polyadenylate-binding protein
Organism
ats  Aegilops tauschii (wheat D)
Pathway
ats03015  mRNA surveillance pathway
ats03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ats00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    109749200
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109749200
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ats03019]
    109749200
   03041 Spliceosome [BR:ats03041]
    109749200
Messenger RNA biogenesis [BR:ats03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     109749200
   mRNA cycle factors
    Stress granule specific factors
     109749200
Spliceosome [BR:ats03041]
 Complex C
  Other components
   Complex C specific factors
    109749200
SSDB
Motif
Pfam: RRM_1 RRM_5 Nup35_RRM PABP
Other DBs
NCBI-GeneID: 109749200
NCBI-ProteinID: XP_020163769
Position
Unknown
AA seq 603 aa
MAGRPLLAPALTLRPPGPALGSRASLYVGDLDDGVAEGHLYAPFCKVAPVASLRICRDVI
GRSLGYAYVNFYSREDAKRALDSLNFTPANGKHIRVMFSNRDPTLRLSGKANIFIKNLVP
NIDGKSLSDMFGRYGTILSCKVATHFNGQSKGYGFVQFSEETSANDAIDSLNGKLVNGKR
IFVGLFIRRQERQPNISVSNYTNVYVKNLPKEFTHNDLLQEFGPFGTITSAVIMRDNDGI
SKCFGFVNYGESECAAEAVKSLNGKMIKDTILYVGRAQKKSEREAELRENFERARNEKFK
KFEGLNLYVKNLDDSINDLNLRGLFEFFGEIGSCKVMVDSQGRSQGYGFVSFTTIEAVHK
AIDGMNRKIVGKKPLYVGVAQRKEERRAMLVAHFARIQNAGVLAPAAQNFAPRQFYVGPR
VPGMFPPQVSTGFGYQQFPQQHFTPWVPSGMTPYTYNMPRPLHHAWRGVHPEINLQPQMV
YPNANQAFTYMPNSMNVNANPVMVPPGFAQTDSTIQDEKLYPLAEQLEPELGGKVTGMLG
EAMEALQGRKVEEASDTVDLASVPSSSTSSVTRDAIDPASTASSSSASADSANLAPAPSS
SSA
NT seq 1812 nt   +upstreamnt  +downstreamnt
atggcaggtcgcccgttgctggccccggccctcacgctgcgtcctcctggaccagcgttg
ggctcgagggcctcgctatacgtcggcgacctcgatgatggcgtggcggaggggcacctc
tatgccccgttctgcaaggtggcgcccgtggcgtccctccgtatatgccgggacgtcatt
ggcaggtcacttgggtacgcctatgtgaatttctacagtcgggaggatgccaaacgtgca
ttagactctttaaattttacccctgccaacgggaagcatatccgagttatgttctcgaat
agggacccaacgctgcgattgagtggaaaggccaatatattcataaaaaatcttgtgcca
aatattgatggcaagagcttgagtgatatgtttggtcgctatggcactatactatcatgc
aaagtggccactcactttaacggtcaatcaaaagggtacggatttgttcagttttcagag
gagacatctgccaatgatgccatcgacagcttgaatggcaagttggtgaatggcaaacga
atttttgtaggtctcttcattcgtcgtcaggagaggcagccaaatatcagcgtgagtaat
tatacaaatgtatatgtgaagaacttgccaaaggaattcactcacaatgaccttctgcaa
gagtttggtccttttggtacaattactagcgctgtaatcatgagagataatgatggaata
tccaaatgcttcggattcgttaactatggggaatcagaatgtgctgcagaagctgtgaaa
agtcttaatggtaagatgattaaggatacaattttgtatgttggaagagctcagaaaaag
tcagaaagagaagcagaactgagagaaaactttgagcgtgcaagaaatgagaaattcaaa
aagtttgaagggctcaatctatacgtgaagaatctagatgatagtattaatgatctaaat
cttagagggttatttgaattttttggtgagataggatcatgcaaggttatggttgattca
caaggaaggagccagggttatggctttgtgtcatttacaaccattgaagctgtccacaag
gccattgacgggatgaacaggaagatagtcggcaaaaagccattgtatgttggtgtagct
caacgcaaagaggaaagacgagcgatgctagtggcacactttgctcgtattcagaacgca
ggagttctagcacccgcagcacaaaattttgctccccgtcagttctacgtcggtccaaga
gtgcctggcatgttcccaccacaggtttctacaggcttcgggtatcagcaattcccacaa
cagcatttcactccttgggttcctagcggcatgacgccatatacgtataacatgccgagg
ccactgcaccatgcttggcgtggtgtgcatccagaaatcaatctacaaccacagatggtg
tacccaaatgccaaccaagccttcacatacatgccaaattctatgaatgtgaatgccaac
cctgtgatggttcccccgggcttcgcgcaaactgatagtactattcaagacgagaaattg
tacccactggctgaacagcttgagccagaattaggagggaaggtgacagggatgctgggt
gaagcaatggaagctctgcaaggaaggaaagtggaagaggccagcgatactgttgacctc
gcgtctgtaccatcatcctcgacctcgagtgttaccagagatgctattgaccccgcttcc
acagcatcgtcctcgagtgcttccgctgacagtgctaaccttgctccggcaccgtcatcc
tcgagtgcttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system