KEGG   Aegilops tauschii (wheat D): 109787073
Entry
109787073         CDS       T04345                                 
Name
(RefSeq) ATP-dependent RNA helicase DEAH11, chloroplastic-like
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6]
Organism
ats  Aegilops tauschii (wheat D)
Pathway
ats03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ats00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109787073
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ats03041]
    109787073
Enzymes [BR:ats01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     109787073
Spliceosome [BR:ats03041]
 Complex C
  Other components
   Step II factors
    109787073
SSDB
Motif
Pfam: IBR Helicase_C OB_NTP_bind DEAD AAA_22 zf-RING_UBOX AAA_19 SLS RRM_1 ABC_tran Arc_MA gp37_trimer HA2_N AAA_30 AAA_29
Other DBs
NCBI-GeneID: 109787073
NCBI-ProteinID: XP_020201223
Position
Unknown
AA seq 1675 aa
MARSHADRPFRPPDRGPLPPHRSQQHRQPHPQSAAILLLRAGPDFSSPPATEVDALVAGL
RPDSLSVFSSGRHAARLLFRSLPAAAAAARDLWSLRLEGRHLLTPYLPDAALAAKAFPLI
SSLFASHASRLLDSDLVSRLAARSSQLAASVQSVKHRLRVRRSNLRDFDQLNLQRKTLEA
DKDLLDAKIAEYKAAMMSIRRAMLSGTDEEEEGVDLFGIVEGDDVDFARVHTMMLRECRR
LNEGLPIYAYRRKILNHIFANQVMILIGETGSGKSTQLVQYLADSGLAANGSIVCTQPRK
IAAITLARRVDEESNGCYADNFVSSCSTFSGSRGFSSEIIFGTDSYLLHHCMNDTGLDGV
SYIIVDEAHERSLNTDLLLALIKKELLDRVDLRLIIMSATADANRLAEYFYGCQTFHVKG
RNFPVEIKYIPDVSVDASFNTVPNSLNDACATASYVNDVVRVVSVIHKNEEEGAILAFLT
SQLEVEWACENFSDASAVVLPMHGKLSHVEQSRVFNSYPGKRKVIFCTNMAETSLTIKEV
KYVVDPGLAKESRFVPSSGLNVLKVNWISQSSANQRAGRAGRTGAGKCYRLYSESHFRMM
EVHQEPEIRKVHLGTAVLRILALGVRDAQNFEFVDAPNPEAINMALKNLEQLGAVKCKCN
LFELTDTGRYLVKLGIEPRLGKIMLDCFDSGLRKEGVILAAVMANSSSIFCRVGTNEEKH
KADLQKVRLCHQDGDLFTLLAVYKKWEDGNGNRNMWCWQNSINAKTMRKCQETISELENC
LKHELNIIVPSYWCWNPEVPSMHDKLLKRIILSSLTGNLAMFLGHEKFGYQVISTDQAVN
LHPSCSLLNYGSKPEWVVFTEILSIPNQYLVCVTAVDHDALYSVHSMSFIHQLEKHKLQI
KVISGLGHNLLRRFCGKYGQNQHRIISHLKEECRDDRITVEINFKNNEVVLFATRQDIEK
VFCIVNGALECEAKMLRNECLERRLFPGRPGSSPLALFGSGAEIKHLELGKRYLTVEVLH
QNAHDINDKELIFLVGSLIPGVANFHKSAGNFRMASDETKWGKLTFLKPEDAEEAVLKLN
GIEFHGSSLKVVPVCSSDNRGLPFPAVRARLSWPCNPSRGRAFGTRLLRPREAPIIGPSV
SACEEALIREISSFMPNKSFPGQNFRVEVFPPEENNSMMRATITFDGSLHREAARALDHL
EGSFLPCCQPWQMIRCKHVFHSTLSCPLHVYNVISQEVNSLLESFRSQKGVSYNFEKTDN
GIFRLKLTANATKTIADLRRPLEILMKGNTINHPDLTISAVQLLMSHDGVVHLKSIEQET
GTYILYDRQSLNIKVFGHQDQMATAETKLVHALTELLEKKPLEISLRGHNLPPDLMKKTV
ENFGVDLEGLKKEMPAVNVELHKQRHLLKVWGSKEDKRRVEGMISELITSVKQNALVQLP
SGSVGGSKDKQRVDDNELAQDACPICLCETEDPFELESCGHMFCWACLVDQCESAMKSHD
GFPVCCLKTGCKKPFLIVDLKHLVSNEKLEDLFRASLRTFVESRAGMYRFCPTPDCQSIY
QVAAPDAETKPFVCGACYVEICTKCHLEYHPFMSCEAYKQYKEDPDATLLEWRRGKENVK
NCPSCGYTIEKSEGCNHVECRCGSHICWACLANFRSSEECYGHLRSAHQSFVDIV
NT seq 5028 nt   +upstreamnt  +downstreamnt
atggctcgatctcacgccgaccgccccttccgcccgccggatcggggtccgctaccgccg
caccgctcacagcagcaccgccaaccgcacccgcagtccgccgcgatcctcctccttcgc
gcgggccccgatttctcctccccgcccgcaacggaggtcgacgcgctcgtcgccggcctc
cgccccgacagcctctccgtcttctcctccggccgccacgccgctcgcctcctcttccgc
tccctccctgcggccgcggccgccgcgcgtgacctctggtcgctccgcctcgagggtcgc
cacctcctcaccccgtacctccccgacgccgccctcgccgcgaaggcattccccctaatc
tcctcgctcttcgcctcccacgcctcccgcctcctcgactccgacctcgtttcccgttta
gccgcccgctcatctcagctcgcagcctccgtccagtctgtcaagcaccgcctgcgcgtc
cgccgcagtaacctccgtgacttcgatcagctaaatctccagaggaaaacgctggaggct
gacaaggatttgttagacgctaaaattgccgagtataaagcagcaatgatgtcgatacgt
cgtgcgatgctaagtgggacggatgaagaggaggagggggttgatctgtttgggattgtg
gaaggtgatgatgtggattttgcgagggtgcacacgatgatgctgcgcgagtgcaggcgg
ctcaacgagggactaccaatctatgcataccgtagaaaaattctcaatcacatattcgct
aaccaggttatgatcttaattggagaaactggttctgggaaaagcacacaattggttcag
tatcttgctgactcaggtcttgctgccaacggttcaattgtctgtacccaacctcgaaaa
attgctgctataacgttggcacgtagagtagatgaagaaagcaatggctgctatgcagac
aattttgtgtcgtcatgttcaaccttttccggttctcggggcttcagttcagagatcata
tttggcacagatagttatcttttacatcactgcatgaacgatacgggcctggatggcgtt
tcatacattattgttgatgaagctcatgaaagaagcttgaacactgatcttctcttagct
ttgataaagaaggagctgcttgatagggtggatttgcgactcattataatgtctgccact
gctgatgctaatagactagctgaatacttttatggctgtcaaacattccatgttaaaggg
cgaaattttcctgttgaaattaaatatatcccagatgtatcagtggatgcttccttcaat
actgtaccgaactctctgaatgatgcttgtgctactgcttcctatgtcaatgatgttgta
agggtggtaagtgtgattcacaagaatgaagaagagggtgccatacttgcttttttgaca
tctcaactggaagttgagtgggcctgtgaaaacttcagcgatgcaagtgctgtggtactt
cctatgcatggaaagctttcccatgtagaacagagtcgtgttttcaacagctatcccggt
aagagaaaagttatcttctgcacgaatatggctgaaacgtcactgaccatcaaagaagtg
aagtatgttgttgatcctggactggccaaggagagcagatttgtgcctagtagtggtctc
aatgtgctgaaagtaaattggatttcccaaagttccgctaatcaacgtgctggccgggcc
ggtcgaacaggagcagggaagtgttacaggctttactctgaatctcacttcagaatgatg
gaagtacatcaagaacctgaaatccggaaagttcatcttggcactgctgttctgagaata
cttgctttgggtgttagggatgcacagaattttgagtttgttgatgccccaaatccagaa
gcaatcaatatggctttgaagaaccttgaacaattgggtgctgtcaaatgtaaatgtaat
ttgtttgagctgactgatactggacgctacctggtcaaattgggaattgagccaaggctt
ggcaaaattatgcttgattgctttgattctggtttgaggaaggaaggtgtaattctagct
gctgttatggcaaattctagcagcatattttgtagagtgggcactaatgaggagaaacat
aaagctgaccttcagaaggtccgattgtgtcaccaagatggagatctcttcactttactc
gctgtttataaaaaatgggaggatgggaatggaaacaggaatatgtggtgctggcagaac
agcatcaacgccaagaccatgaggaagtgccaggaaactatatcagagcttgaaaattgt
ctaaagcatgaactcaacattattgtcccaagttattggtgttggaatcctgaggttcct
tctatgcatgataagttgctaaagagaattattctatcatctcttacaggcaatcttgct
atgtttttaggacatgaaaagtttggttaccaggtgatttcgacagatcaggctgtgaac
cttcatccctcatgctcattgctcaattatggcagcaagccagagtgggtggtgtttaca
gaaatcttatcaatcccaaatcagtatttggtatgtgtaactgctgttgatcatgatgcg
ttgtattcagttcattccatgtccttcattcatcaactggagaaacataaactgcagata
aaagtgattagtgggcttggtcataatttattgcgaagattttgtggcaaatatggccaa
aatcaacacaggattatctcacatctcaaggaagaatgcagggatgaccgaataacagtc
gaaattaacttcaaaaacaatgaagttgtgttatttgctacaaggcaggacatagaaaag
gtcttttgcattgttaacggtgctttggagtgtgaagctaagatgttgaggaatgagtgc
ctcgagagaagattatttcctgggaggcctggcagttctcctcttgcattgtttggctcg
ggtgctgaaatcaagcatttggaacttgggaagaggtatctaacagtagaggttctccat
caaaatgctcatgatatcaatgacaaggagcttatttttttggtgggcagtctgatcccc
ggtgtcgctaattttcataaatcagctgggaactttcggatggcctcagatgaaactaaa
tgggggaagcttacattcctcaaacctgaagatgctgaagaagctgtgttaaaattgaac
ggaatagagtttcatggttcctcattaaaagtggttccagtatgttcttctgataatcga
ggattaccatttcctgcggtaagagctagactatcatggccatgtaacccaagcaggggg
cgtgcatttgggacccgtttgctcaggcccagggaagcacccataattggcccttctgtt
tctgcatgtgaagaagcgctgattagagaaatttcttcgttcatgccaaacaagagtttt
cctggacaaaatttccgcgttgaagtcttccctccagaggaaaacaattcaatgatgaga
gcaactataacttttgatggaagtcttcatcgagaggctgcaagagcgctggaccatctt
gaaggaagctttcttccttgttgtcaaccttggcagatgatacggtgcaagcatgtattt
catagtactctgtcctgcccattacatgtttacaatgttatcagccaggaagttaattct
ctgcttgagagcttccgaagccagaaaggtgtgtcttacaatttcgaaaagactgataat
ggtattttccggttaaagctcactgcaaatgccacaaaaacaatagcagatttgagaagg
cctcttgagattttgatgaaaggcaacactataaaccaccctgacctgacaataagtgca
gttcagctacttatgtcccatgatggtgtagtacatttgaaatctattgaacaagaaact
ggtacttacattctttacgacagacaaagtctgaatattaaagtctttgggcaccaagat
cagatggctacagcagagacaaaattggtgcacgcacttacagagctccttgagaagaag
cccctggaaattagtcttcgtggccataacctccctccagacttgatgaagaaaacagta
gagaactttggagttgatctggaaggacttaagaaagaaatgcctgcagtaaatgttgag
ttacataaacagcgacatctacttaaagtttggggcagtaaagaggataagcgaagggtt
gaagggatgatctctgagctgataacctctgttaaacagaatgccctggttcaacttccg
tcagggagtgttggaggaagtaaggataagcaaagggtggatgacaatgagctggcgcag
gatgcgtgccctatttgcttgtgtgagactgaagacccttttgagcttgaatcatgtggg
cacatgttttgttgggcttgcttagtggatcagtgtgaatctgccatgaaatctcatgat
gggttccctgtttgctgcctgaaaactgggtgcaagaagcccttcctcatagttgatttg
aagcacctggtgtctaatgagaagctggaggacctattcagagcttccttgaggacattt
gttgaatctagagcaggaatgtatcgcttctgcccgacacccgattgccaatccatctac
caagtggcagctccagatgcagagaccaagccttttgtctgcggggcttgctatgtcgag
atctgcaccaagtgccatctcgagtatcatcctttcatgtcctgcgaggcttacaagcaa
tacaaggaagacccagacgcgacgctgcttgaatggcgcagagggaaggagaatgtgaag
aactgcccttcgtgtggatacacgatcgagaaatctgagggttgcaaccatgtcgagtgc
aggtgcggcagccacatttgctgggcatgcttggcgaacttcaggagcagcgaggagtgt
tatggccatctcaggtctgcgcaccaatcctttgtggacattgtgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (15)   
   Pfam (15)   
All databases (30)   

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