KEGG   Agrobacterium fabrum: Atu2250
Entry
Atu2250           CDS       T00070                                 
Symbol
papS
Name
(GenBank) poly(A) polymerase
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
atu  Agrobacterium fabrum
Pathway
atu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:atu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Atu2250 (papS)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atu03019]
    Atu2250 (papS)
Enzymes [BR:atu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     Atu2250 (papS)
Messenger RNA biogenesis [BR:atu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     Atu2250 (papS)
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_RNAbd tRNA_NucTran2_2
Other DBs
NCBI-ProteinID: AAK87992
UniProt: Q7CXI6
Position
circular:complement(2221609..2222865)
AA seq 418 aa
MNSLAGQDWFEKPALKRIFALLNADGGEVRIVGGAVRNALMDLPVVDVDMATTVTPNVVV
ERAKAAGIKSVPTGIEHGTVTLVIDGEGFEVTTLRRDVETNGRHAQVAFGTDWQTDAERR
DLTINALYANEKGEIIDLVDGLADVETRTVRFIGDAAMRISEDYLRILRFFRFFAHYGSG
RPDADGLRASARAKDKLGTLSAERVWSETKKLISARDPSRALLWMRQSGVLSEILPETEK
WGIDAIHGLVATEQALGWAADPMLRLAAIVPPDRERLAALAARLRLSKAEAAYLTHWASA
PAVDPEMKETALDRLLYRQGVEAVKTRLKLALASARADLSAGDTAMHKVARLSTLLTRAE
KFRKPGFPLSGADVMAAGVEAGPKVGEVLKSLEEKWIDVNFSLDRAALTARLKDMLEN
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgaatagccttgccgggcaggactggttcgaaaaaccggcgctcaagcgtatcttcgcg
cttctgaatgccgatggcggcgaggtgcggatcgtcggcggcgcggtgcgcaatgcgctg
atggatttgccggttgtcgatgtcgacatggcgacgacggtgacccctaatgtggttgtt
gagcgggcgaaggccgcgggcatcaagtcggtgccaacaggcatcgaacacggcacggtg
acgctggtgatcgatggcgagggtttcgaggtgacgacgttgcgccgcgatgtcgagaca
aatggccgccatgcccaggtggccttcggcacggactggcagaccgatgccgagcggcgg
gatctcaccatcaacgccctttacgctaacgaaaagggtgagatcatcgaccttgtcgat
ggtctagcggatgtggaaacccgcacggtgcgcttcatcggggatgcggcgatgcggatt
tcggaagattatcttcgaatcctgcggttttttcgctttttcgcccattatggttcaggc
cgccctgatgccgacggtttgcgggcgagtgcgcgggccaaggacaagcttggaacgctt
tcggctgagcgggtgtggagcgaaacgaagaaactgatttctgcccgcgacccatcccgc
gcactcctgtggatgcggcaatcgggtgttctctcggaaattcttcccgagacggaaaaa
tggggcattgatgccattcacgggctggtggcgacggagcaggcgcttggttgggccgct
gatccgatgctgcggcttgccgccatcgttccgcccgacagggagaggctcgctgcgctt
gcagcccgcctcaggctgtcaaaggccgaggcggcttatcttacgcattgggcttctgcc
cctgccgtcgatccggagatgaaagaaacggcattggaccgcctgctttaccggcagggt
gtcgaggccgtgaagacacgattgaaacttgcgcttgcttcggctcgcgccgatctctca
gccggcgatacggccatgcacaaagtcgcgcgcctttcgacgttgctgacgagggcagag
aagttccgcaagccgggttttccgctgagcggtgccgatgtgatggccgccggcgtcgag
gctggtccgaaggtaggcgaggtgctgaaaagcctcgaagaaaagtggatcgacgtcaat
ttctcactcgaccgggcagcgctgaccgcccggctgaaggatatgctcgagaattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (26)   

Download RDF
DBGET integrated database retrieval system