KEGG   Trichormus variabilis: Ava_1242
Entry
Ava_1242          CDS       T00277                                 
Name
(GenBank) Photosystem II reaction centre protein PsbD/D2
  KO
K02706  photosystem II P680 reaction center D2 protein [EC:1.10.3.9]
Organism
ava  Trichormus variabilis
Pathway
ava00195  Photosynthesis
ava01100  Metabolic pathways
Module
ava_M00161  Photosystem II
ava_M00611  Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:ava00001]
 09100 Metabolism
  09102 Energy metabolism
   00195 Photosynthesis
    Ava_1242
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   00194 Photosynthesis proteins [BR:ava00194]
    Ava_1242
Enzymes [BR:ava01000]
 1. Oxidoreductases
  1.10  Acting on diphenols and related substances as donors
   1.10.3  With oxygen as acceptor
    1.10.3.9  photosystem II
     Ava_1242
Photosynthesis proteins [BR:ava00194]
 Photosystem and electron transport system
  Photosystem II (P680 chlorophyll a) [OT]
   Main subunits
    Ava_1242
SSDB
Motif
Pfam: Photo_RC
Other DBs
NCBI-ProteinID: ABA20866
CyanoBase: Ava_1242
UniProt: Q3MA59
Position
1529297..1530352
AA seq 351 aa
MTIAVGRAPSRGWFDVLDDWLKRDRFVFVGWSGILLFPCAFLALGGWLTGTTFVTSWYTH
GLASSYLEGANFLTVAVSSPADSMGHSLLLLWGPEAQGDFTRWCQLGGLWPFVALHGAFG
LIGFMLRQFEIARLVGIRPYNALAFSAPIAVFVSVFLMYPLGQSSWFFAPSFGVAAIFRF
LLFLQGFHNWTLNPFHMMGVAGVLGGALLCAIHGATVENTLFEDGEGANTFRAFNPTQSE
ETYSMVTANRFWSQIFGIAFSNKRWLHFFMLFVPVTGLWMSAVGIVGLALNLRAYDFVSQ
ELRAAEDPEFETFYTKNILLNEGIRAWMAPQDQPHEKFVFPEEVLPRGNAL
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgaccatcgcagtaggaagggcccccagtagagggtggtttgacgtactagacgactgg
ttaaagcgcgatcgcttcgtattcgtaggttggtcagggatattattatttccttgcgcc
ttcctagcactaggcggttggctaaccggtacaacatttgtcacatcgtggtacacccac
ggactagcatcatcctacctggaaggagcaaacttcctgacagtagcagtatcaagccca
gcagacagcatgggacactccctgttgttgttgtggggaccagaagcccaaggggacttt
acccgttggtgtcagctaggagggttatggccattcgtagccctacacggagccttcggt
ttgatcggattcatgctacgtcaatttgaaattgcgcgcctagtaggaatcagaccctac
aacgcactagcattttcagcacccatagcggtattcgtcagcgtattcctgatgtaccca
ttgggacaatcatcttggttctttgcaccaagctttggagtagcagcaatcttcagattc
ttgttattcctccaagggttccacaactggacactaaaccccttccacatgatgggagta
gcaggtgtactaggtggagcgctactgtgtgccatccacggtgcaacagtagaaaacacc
ctatttgaagacggcgaaggcgcaaacaccttccgcgccttcaaccccacccaatcagaa
gaaacctattcaatggtgacagcgaaccgattctggtcacagatattcgggattgctttc
tccaacaaacgctggttgcacttcttcatgttgttcgtacccgtcactgggttgtggatg
agtgcggtaggcatcgttggtttagcattgaacctgcgggcttatgacttcgtttcccaa
gaattacgggcagcagaagacccagaatttgaaaccttctataccaagaacattttgctg
aacgagggtatccgcgcttggatggctcctcaagatcagcctcacgaaaaatttgtattc
cccgaagaggtactaccacgtggtaacgctctctaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   CYANOBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (1)   
   Pfam (1)   
All databases (24)   

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