KEGG   Azotobacter vinelandii CA6: AvCA6_51710
Entry
AvCA6_51710       CDS       T02634                                 
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
avd  Azotobacter vinelandii CA6
Pathway
avd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:avd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    AvCA6_51710 (recB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:avd03400]
    AvCA6_51710 (recB)
Enzymes [BR:avd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     AvCA6_51710 (recB)
DNA repair and recombination proteins [BR:avd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AvCA6_51710 (recB)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C UvrD_C_2 AAA_19 AAA_25 PDDEXK_1 AAA_11 AAA_30
Other DBs
NCBI-ProteinID: AGK18633
UniProt: M9YHQ1
Position
complement(5219070..5222750)
AA seq 1226 aa
MSQPPTAERPLALRFPLHGSRLIEASAGTGKTFTISALYLRLVLGHGGEAGFSRELLPPE
ILVVTFTDAATRELRDRIRARLVEAAKVFREEAPGDGLLRQLRADFSAERWPACARRLDI
AAQWMDEAAVSTIHGWCQRMLREHAFDSGSLFTQTLETDHGELLAEVVRDYWRQHCYPLS
AAALGWVMEHWGHPDALLKDKLGPLLGEAQPLPAEPLGALLERALAEQAGELARLKEGWN
AWADELEALLDAAVQAKRVDGRKIQARYYRPWCEKLRAWAVGDGTDLDLGSGFARLTPEG
LAEAWKGESPRHPALEAMRALPARLRTLSGPDEPARRHAAAWVSLRFEQEKRRRAEMGFD
DMLSRLDAALRGDNGGRLAELIRGQFPVALIDEFQDTDPLQYRIFDRIYAIASNRADCGL
FLIGDPKQAIYAFRGADIHTYLRARQATEGRHYNLETNFRSSQALVSAVNRVFRLAERRE
AGHGAFLFRDGTTNPLPFLEVGAQGREEVWQIGGNAQPALNLWHLEDEAPLPGGAYRAQM
AERAASEIVRLLNLGQRGGAGFVRDGRLQPLRPSDIAILVRDFKEAEAIRGQLAARGVRS
VYLSDKDSVFASPEARDLLLWLRACAEPDVDRPLRAALASRSLGLALAELEELNRDERIW
ERRVMQFRGYRQRWQRQGVLPMLHQLLHDFDLPQRLMARPDGERALTNLLHLAELLQRAA
AGLDGEQALIRHLSELLAGEIQVAEEQVLRLESDAALVRVVTIHKSKGLEYPLVFLPFVC
AFRAVEGGRPLWVYDGERRRLVLTPGEDEVARADRERLGEELRLLYVALTRARHACWLGV
ADLCVGNARKSRLHDSALGYLLGGAVPLERSAALADWLAPLDVAGESAVLEAPEASGERF
VEQAVARSKPQWRTPARSAAEHWWIASYSALRIGAGEERLADSQIPASRFDDAAPDSPAA
QKVADDERESVFVPLRAGETPTLHRFPRGPNPGTFLHGLLEMAGREGFAALAAEPARLRE
LIARRCQLRGMTEWIDPLADWLLDLLTRPLALGGDRCVALVGLGQYQPELEFWFEARAVD
VRRIDELVQERVLPGLSRPALAKDRLNGMFKGFIDLAFEHGGRYYLLDYKSNWLGEGDAA
YSAEAMAATAASHRYDLQSVLYLLALHRQLRARLPGYDYDAHLGGALCLFLRGSRAAGQG
IHWVRPPRELIETLDALFEGKKEAEA
NT seq 3681 nt   +upstreamnt  +downstreamnt
atgagccagccgccgaccgccgagcgcccgctggcgctacgcttcccgctgcacggcagc
cgcctgatcgaggccagcgccggtaccggcaagaccttcaccatctccgccctttacctg
cgcctggtgctcggccatggcggcgaggcgggcttttcccgcgagttgctgccgccggag
atcctcgtggtgaccttcaccgacgccgccacccgcgagctgcgcgaccgcatccgcgcg
cggctggtcgaggcggccaaggtgtttcgcgaggaggcgccgggcgacggtctgctgcgg
cagttgcgcgccgacttttccgccgagcgctggccggcctgcgcgcgccgcctggacatc
gccgcgcagtggatggacgaagcggcggtgtcgaccattcacggctggtgccagcgcatg
ctgcgcgagcacgccttcgacagcggcagcctgttcacccagaccctggagaccgaccac
ggcgaactgctcgccgaggtggtgcgcgactactggcgccagcactgctacccgctctcc
gctgcggcgctgggctgggtgatggagcactgggggcatccggatgcgctgctcaaggac
aagctgggcccgctgctcggcgaggcgcagccgctgccggccgagccgctcggtgcgctg
ctggagcgggcgctggccgagcaggccggcgaactggcccggctgaaggaaggctggaac
gcctgggccgacgagctggaagcgttgctcgatgcggcggtgcaggccaaacgggtggac
ggacgcaagatccaggcgcgctactaccggccctggtgcgagaagttgcgcgcctgggcc
gttggcgacgggacggacctcgacctcggcagcggcttcgcccgcctgacccccgagggc
ctggccgaggcctggaagggcgagtcgccgcgccatccggcgttggaggccatgcgcgcg
ctgccggcgcgcctgaggacgctgtccggccccgacgagccggcccggcgccatgccgcc
gcctgggtaagcctgcgcttcgagcaggaaaagcgccggcgcgccgaaatgggtttcgac
gacatgctgagccgcctcgacgccgccctgcggggcgacaacggcgggcgcctggccgag
ctgatccgtggccagttcccggtggcgctgatcgacgagttccaggacaccgacccgctg
cagtaccgcatcttcgaccgcatctacgccatcgcgagcaaccgcgccgactgcggcctg
ttcctgatcggcgaccccaagcaggcgatctacgccttccgcggcgccgatatccatacc
tacctgcgcgcccgccaggccaccgagggccgccactacaacctggaaaccaacttccgc
tccagccaggcgctggtttccgcggtcaatcgggtattccgcctggccgagcggcgcgaa
gccgggcacggcgccttcctgttccgcgacggcacgaccaacccgctgccctttctcgaa
gtgggcgcgcagggccgcgaagaggtctggcagatcgggggcaatgcgcagccggcactg
aatctctggcatctggaggacgaggcgccgctgcccggcggcgcctaccgcgcgcagatg
gccgaacgcgccgccagcgagatcgtccgcctgctgaacctcggccagcggggcggggcg
ggcttcgtccgggacgggcggctgcagccgctgcgccccagcgatatcgccattctggtg
cgcgacttcaaggaggccgaggcgatccgtggccaactggccgctcgcggggtacgcagc
gtctacctgtcggacaaggattcggtgttcgccagccccgaggcgcgcgacctcctgctg
tggctgcgcgcctgcgccgaaccggacgtcgaccgcccgctgcgcgccgccctggccagc
cgcagcctgggcctcgcgctggccgagctggaggaactgaaccgcgacgagcgcatctgg
gagaggcgcgtcatgcagttccgcggctaccgccagcgctggcagcgccagggcgtgctg
ccgatgctgcaccaactgctgcacgacttcgatctgccgcagcggctgatggcgcgcccc
gacggcgagcgcgcgctgaccaacctgctgcatctggccgagctgctgcagcgtgccgcc
gccgggctggacggcgagcaggcgctgatccgccatctgtccgagctgctggccggcgag
atccaggtcgccgaggagcaggtgctgcgcctggagagcgacgcggcgctggtgcgggtg
gtgaccatccacaaatccaagggtctggagtatccgctggtgttcctgccgttcgtctgc
gccttccgcgcggtggagggcggcaggccgctgtgggtgtacgacggcgagcgccgccgg
ctggtgctgacgccgggcgaggacgaggtggcgcgtgccgaccgcgagcgcctgggcgag
gaactgcgcctgctctacgtggctctgacccgcgcccgccacgcctgctggctgggcgtc
gccgacctctgcgtcggcaatgccagaaaatcgcgcctgcacgactcggcgctcggctat
ctgctcggcggcgctgtgccgctggagcgcagcgccgccctggccgactggctcgcgccg
ctggacgtggcgggtgagagcgcggtgctggaggcgcccgaagccagcggcgagcgcttc
gtcgagcaggccgtcgcccggagcaagccgcaatggcgcaccccggcgcgcagcgccgcc
gagcactggtggatcgcctcctacagcgccctgcgcatcggcgccggcgaggaaaggctg
gccgacagccagataccggccagccgcttcgacgacgccgcgccggacagcccggcggca
cagaaggtcgccgacgacgagcgcgagagcgtcttcgtgccgctgcgcgcgggcgaaacg
ccgaccctgcatcgttttccgcgcggccccaatcccggcaccttcctccacggcctgctg
gaaatggccggccgcgagggcttcgccgcgctggccgccgagcccgcgcggctgcgcgag
ctgatcgcccggcgctgccagttgcgtggcatgaccgagtggatcgatccgctggccgac
tggctgctcgacctgctgaccaggcccctggcgctcggcggggaccggtgcgtggcgctg
gtcgggctcggccagtaccagcccgaactggagttctggttcgaggcgcgcgccgtcgac
gtgcgccgcatcgacgaactggtccaggagcgggtgctgcccggcctgtcgcgtccggca
ctggcgaaggaccggctcaacggcatgttcaagggcttcatcgacctggcgttcgagcac
ggcgggcgctactacctgctcgactacaagtccaactggctgggcgagggcgatgccgcc
tacagcgccgaggcgatggcggcgaccgccgccagccaccgctacgacctacagtcggtg
ctctacctgctggccctgcaccgccagttgcgggcgcgcctgcccggctacgactacgac
gcgcacctgggcggcgcgctctgcctgttcctgcgcggcagccgcgcggcggggcagggc
atccattgggtgcgcccgccacgcgagctgatcgagacgctggatgcgctgttcgagggc
aagaaggaggccgaggcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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