KEGG   Allorhizobium ampelinum: Avi_1610
Entry
Avi_1610          CDS       T00851                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
avi  Allorhizobium ampelinum
Pathway
avi00260  Glycine, serine and threonine metabolism
avi00460  Cyanoamino acid metabolism
avi00630  Glyoxylate and dicarboxylate metabolism
avi00670  One carbon pool by folate
avi00680  Methane metabolism
avi01100  Metabolic pathways
avi01110  Biosynthesis of secondary metabolites
avi01120  Microbial metabolism in diverse environments
avi01200  Carbon metabolism
avi01230  Biosynthesis of amino acids
avi01240  Biosynthesis of cofactors
Module
avi_M00140  C1-unit interconversion, prokaryotes
avi_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:avi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    Avi_1610 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    Avi_1610 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Avi_1610 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    Avi_1610 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    Avi_1610 (glyA)
Enzymes [BR:avi01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     Avi_1610 (glyA)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 DegT_DnrJ_EryC1 Beta_elim_lyase
Other DBs
NCBI-ProteinID: ACM36154
UniProt: B9JV74
Position
1:1350531..1351820
AA seq 429 aa
MANTDAFFSRPLAETDPDIFGAIEKELGRQRHEIELIASENIVSRAVLEAQGSIMTNKYA
EGYPGKRYYGGCQFVDIAEELAIERAKKLFGVNFANVQPNSGSQMNQAVFLALLQPGDTF
MGLDLNSGGHLTHGSPVNMSGKWFNVVSYGVRQDDNLLDMDAVAESARKHKPKLIIAGGT
AYSRIWDWKRFREIADEVGAYLMVDMAHIAGLVAGNQHPSPFPHCHVATTTTHKSLRGPR
GGMILTNDEDLAKKFNSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFQDYAAQVVKNAKA
LSETLVKGGLDIVSGGTDNHLMLVDLRKKNATGKRAEAALGRAYVTCNKNGIPFDPEKPF
VTSGVRLGTPAGTTRGFKEAEFIEIGNLIVEVLDGLKVANSDEGNSAVEASVRDKVIGLT
GRFPMYPYL
NT seq 1290 nt   +upstreamnt  +downstreamnt
atggccaataccgatgctttcttttcccgtccgcttgccgaaaccgacccggatattttt
ggtgcgattgaaaaggagctcggtcgtcaacgccatgaaatcgagctgattgcgtctgaa
aacatcgtctcgcgcgccgtgctggaagcgcaaggctcgatcatgaccaacaaatatgcc
gagggctatccgggcaagcgctattacggtggctgtcagttcgtggatattgccgaggaa
ttggcgattgagcgcgccaagaagctgtttggcgtcaattttgccaatgttcagcccaat
tccggttcgcagatgaaccaggccgtgttcctggcactgttgcagccgggcgataccttc
atgggtctcgacctgaattccgggggccatctgacccacggttcgccggtcaacatgtcc
ggcaagtggttcaacgtcgtctcctatggcgtgcgtcaggacgataatcttctggacatg
gatgcggtggctgaatcggctcgtaaacacaagcccaagctgatcatcgccggtggcaca
gcctattcgcggatctgggactggaagcgcttccgcgagatcgccgacgaagtcggcgcc
tatctgatggttgacatggcccatatcgccggtctggttgccggtaaccagcatccgtcg
ccgttcccgcattgccacgtcgccaccaccacgacccacaagtcgctgcgtggcccgcgt
ggcggcatgatcctcaccaatgacgaggatctggccaagaaattcaattcggctgtcttc
ccaggcctccagggcggcccgctgatgcatgtgattgccgccaaggcggttgccttcggt
gaggccttgcagccggaattccaggattatgccgctcaggtggtgaaaaacgccaaggcc
ctgtccgaaaccctggtcaagggtggcctcgatatcgtctccggcggtaccgacaatcat
ttgatgctggtcgacctgcgcaagaagaacgccaccggcaagcgcgccgaggcagccctt
ggccgcgcctatgtcacctgcaacaagaacggcattccgttcgatcctgaaaagcccttc
gttacttctggtgttcgccttggcacgccagctggcacgacccgtggcttcaaggaggct
gaattcatcgaaatcggcaatctgatcgttgaggttctcgacggtctgaaggttgccaat
tccgacgagggcaatagcgccgtcgaggcaagcgtgcgcgacaaggtcattggcctgacg
ggccgtttcccgatgtatccttacctgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (15)   
   KEGG PATHWAY (11)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (37)   

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