KEGG   Allorhizobium ampelinum: Avi_9651
Entry
Avi_9651          CDS       T00851                                 
Symbol
trbF
Name
(GenBank) conjugal transfer protein
  KO
K20531  type IV secretion system protein TrbF
Organism
avi  Allorhizobium ampelinum
Pathway
avi02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:avi00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Avi_9651 (trbF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:avi02044]
    Avi_9651 (trbF)
Secretion system [BR:avi02044]
 Type IV secretion system
  Trb secretion system protein
   Avi_9651 (trbF)
SSDB
Motif
Pfam: VirB8
Other DBs
NCBI-ProteinID: ACM39355
UniProt: B9K3A7
Position
pAtS4b:complement(120719..121384)
AA seq 221 aa
MAKKLKHFDNPYLAARHEWNERMGGANRAARAWMTVGSVSLVMATVGFGFALYQASQVKL
VPYIVQVDTLGNSVTGGFPAQIEYADERVVRNMLGQFVYNFRSITPDNVVQKGYIDRTYA
MLRRTDPSTEKVNNWFRNNSPFDRARTVTVSVEINNIVALSNQSYQIDWTEIERDRAGKE
LRTRRWRGIATVTLSPPQDEAIIRLNPIGLYLKDFDWTAQL
NT seq 666 nt   +upstreamnt  +downstreamnt
atggccaaaaagctgaagcatttcgacaacccgtatctggcggcgcgtcacgaatggaat
gagcgcatgggcggcgccaaccgcgcagccagagcatggatgaccgtcggatcggtttcg
ctggtgatggcgacggtgggtttcggcttcgcgctctatcaggccagccaggtcaagctt
gtcccctatatcgtgcaggtcgacacgctcggaaattctgttacgggcgggttcccggca
cagatcgaatatgccgacgagcgcgtcgttcgcaacatgctcggccagttcgtttataac
ttccgatcgatcacgccggataatgtggtccagaagggctatatcgaccgcacctatgcg
atgcttcggcgcactgacccctccacggaaaaggtcaacaactggttccggaataactcg
cccttcgatcgcgcccggacagtgacggtgtccgtcgagatcaacaacatcgtggccctc
tccaaccagtcgtaccagatcgactggactgagatcgagcgcgatcgggcgggcaaggaa
ctgcggacccggcgatggcgcgggatcgccaccgtgaccctgtcgccgccccaggacgaa
gctatcattcgcctcaacccgatcggtctttacctcaaggacttcgattggacggcccaa
ctttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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