KEGG   Apaloderma vittatum (bar-tailed trogon): 104278795
Entry
104278795         CDS       T08559                                 
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
avit  Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03013  Nucleocytoplasmic transport
avit04141  Protein processing in endoplasmic reticulum
avit04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:avit00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    104278795 (SEC13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    104278795 (SEC13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    104278795 (SEC13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:avit03019]
    104278795 (SEC13)
   04131 Membrane trafficking [BR:avit04131]
    104278795 (SEC13)
Messenger RNA biogenesis [BR:avit03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     104278795 (SEC13)
Membrane trafficking [BR:avit04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    104278795 (SEC13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    104278795 (SEC13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    104278795 (SEC13)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 MIOS_WD40
Other DBs
NCBI-GeneID: 104278795
NCBI-ProteinID: XP_009874190
Position
Unknown
AA seq 329 aa
LVRVLFLPPQVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIA
DLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTYEYTGHDSSVNSVCW
APHDYGLILACGSSDGAISLLSYTGDGQWEIKKISNAHTIGCNAVSWAPAVVPGSLIEQP
SGQKPNYIKRFASGGCDNLVKIWKEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIA
SCSQDGRVFIWTCDDASGNSWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES
VDGLWACISDVNKGQGGVSAVTEGQQNEQ
NT seq 990 nt   +upstreamnt  +downstreamnt
cttgttcgtgttctgttcctccccccgcaggtctcggtcattaacaccgtggacacttcg
cacgaggacatgatccacgatgctcagatggattactacggcacccgcttagcgacctgc
tcttcagaccgatccgtgaaaatctttgatgttcggaatggagggcaaatcctcattgcg
gacctgagagggcacgaaggtcccgtgtggcaggttgcctgggctcatcctatgtacgga
aatatcttggcttcctgttcctatgacaggaaagtgattatctggaaggaagaaaatggc
acgtgggaaaagacatacgagtacacagggcacgattcctcagtgaattctgtctgctgg
gcgccgcatgactacggactgatcctggcctgcgggagctctgatggggccatttcgtta
ctgagctacacgggtgacgggcagtgggaaatcaaaaagatcagcaatgcccatacgatt
ggatgtaacgcagttagctgggctcctgctgttgtcccaggaagccttatagaacagcca
tctggtcaaaaaccaaactacatcaaaagatttgcgtctggtggctgtgacaaccttgtc
aagatctggaaggaagaagatggtcagtggaaggaagagcagaagctggaggctcacagt
gactgggttcgggacgtggcctgggctccatccataggtttgccaacgagcaccattgct
agctgctcacaggatggcagagtgtttatctggacgtgtgatgatgcctctggaaattca
tggtcgcccaagctgctgcacaagttcaatgatgttgtctggcacgtgagttggtccatt
actgccaacatccttgcagtgtcgggaggagacaataaagtcacgctgtggaaggagtcg
gtggacggactgtgggcgtgtatcagcgatgtcaacaagggccaaggaggggtgtcggcc
gtgacagaggggcagcagaatgagcagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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