KEGG   Aeromonas veronii TH0426: AMS64_18750
Entry
AMS64_18750       CDS       T04529                                 
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
avo  Aeromonas veronii TH0426
Pathway
avo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:avo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AMS64_18750
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:avo03019]
    AMS64_18750
   03016 Transfer RNA biogenesis [BR:avo03016]
    AMS64_18750
Enzymes [BR:avo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     AMS64_18750
Messenger RNA biogenesis [BR:avo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     AMS64_18750
Transfer RNA biogenesis [BR:avo03016]
 Prokaryotic type
  tRNA degradation factors
   AMS64_18750
SSDB
Motif
Pfam: RNase_PH RNase_PH_C PNPase S1 KH_1 KH_2 CsrA SLS1_KH2 DUF5813
Other DBs
NCBI-ProteinID: AMQ44248
UniProt: A0A142E7W0
Position
complement(4107983..4110130)
AA seq 715 aa
MNPIVKSFQYGQHTVTLETGVMARQATAAVMVSMDDTCVFVTVVGKKEADHGRDFFPLTV
NYQERTYAAGRIPGGFFRREGRPSEGETLISRLIDRPIRPLFPEGFLNEVQVVATVMSVN
PAVSPDIVAMIGASAALAISGIPFGGPIGAARVGYMNGQYVLNPTTTELPQSDLDLVVAG
TANAVLMVESEAAILSEEVMLGAVVYGHEQMQTVINAINEFAAAVGTKPWDWTPPAVNEA
LKAKVAELASAELGEAYRITEKAVRYETIAAIKGRVVEQVIASGVEEDAKKIGEEFHSLE
SRIVRGRVVRGEPRIDGRDPEMIRALSVGTGILPRAHGSALFTRGETQAIVVATLGTERD
AQNIDELTGNRADRFMLHYNFPPYCVGETGMMGSPKRREIGHGRLAKRGVAAVMPSAAEF
PYVVRVVSEITESNGSSSMASVCGSSLALMDAGVPIKASVAGIAMGLVKEEEGFVVLSDI
LGDEDHLGDMDFKVAGTTEGVTALQMDIKIEGITKEIMEIALKQARGARLHILKVMDEAI
QAPRAQISDFAPRIHTIKINPEKIKDVIGKGGSVIRALTEETGTNIELDDDGTVRISAVA
NEAAMEAIRRIEAITAEIEVNRIYEGKVVRLADFGAFVNILPGKDGLVHISQITDARVQN
VADHLTIGDVVKVKVLEVDRQGRVRLSIKEANAPTEAAAPAADAAPAAEEAPAAE
NT seq 2148 nt   +upstreamnt  +downstreamnt
gtgaatcctattgtaaagtcattccagtacggtcaacacaccgtcactctggaaaccggt
gtgatggcccgtcaagccactgcggccgttatggtcagcatggacgatacctgcgtattt
gtgaccgtagtcggcaagaaagaggccgatcacggccgtgatttcttcccgctgaccgtc
aactaccaggagcgtacctatgctgctggtcgtatcccgggtggtttcttccgtcgtgaa
ggccgtccgagcgaaggcgagaccctcatctcccgtctgatcgaccgtcctattcgtccg
ctgttcccggaaggcttcctcaatgaggttcaggtcgttgcgaccgtaatgtccgtgaat
ccggccgtatcccccgacatcgttgccatgatcggtgcctctgccgcactggccatctcc
ggtatcccgtttggcggcccgatcggtgctgctcgcgtgggttacatgaacggtcagtat
gtgctgaacccgaccactaccgaactgccgcagagtgatctggatctggtggttgccggt
actgccaatgccgtgctgatggttgagtccgaagcggccatcctctctgaagaagtgatg
ctgggtgccgtggtatacggtcatgagcagatgcagaccgtgatcaatgcgatcaacgag
tttgccgctgccgtcggcaccaagccgtgggactggactccgcctgccgtcaacgaagcg
ctgaaagccaaggttgccgagctggcgagcgccgaactgggtgaagcctaccgcatcacc
gagaaggctgtccgttacgaaaccatcgcagccatcaagggtcgtgtggttgagcaagtt
atcgcttccggtgtggaagaagatgccaagaagatcggcgaagagttccacagcctagaa
agccgcatcgttcgtggtcgcgtagtacgtggtgagccgcgtatcgatggtcgcgatcct
gaaatgatccgcgctctgagcgtaggtaccggtattctgccccgtgcccacggttctgcc
ctgttcacccgtggtgaaactcaggccatcgtggtcgccactctggggaccgagcgtgat
gcccagaacatcgacgagctgaccggcaaccgtgccgatcgcttcatgctgcactacaac
ttcccgccatactgtgtcggtgagaccggcatgatgggtagcccgaagcgtcgtgaaatc
ggtcacggccgtctggccaagcgcggcgttgctgccgtgatgccgagcgccgccgagttc
ccgtacgtggtgcgcgtggtctctgaaattaccgaatccaacggttcctcctccatggcg
tctgtctgtggttcctctctggcgctgatggatgccggtgtgccgatcaaggcctccgtt
gccggtatcgccatgggtctggtgaaggaagaagaaggtttcgtcgtgctgtccgacatt
ctgggtgacgaagatcacctgggcgacatggacttcaaagtagccggtaccaccgaaggt
gtgaccgcgctgcagatggacatcaagatcgaaggcatcaccaaagagatcatggagatt
gctctgaagcaagctcgtggcgctcgtctgcacatcctgaaagtgatggacgaagctatc
caggctccccgtgcccagatctccgattttgcaccgcgtatccacaccatcaagatcaat
cctgagaagatcaaggacgtgatcggtaagggtggttccgtgatccgtgcgctgaccgaa
gagaccggcaccaacatcgagctggatgatgacggtactgtacgtatctccgccgtggcc
aacgaagccgccatggaagcgatccgtcgcatcgaggctatcaccgccgagatcgaagtg
aaccgcatctatgaaggtaaagttgttcgtctggccgatttcggtgcattcgtcaacatt
ctgccgggcaaagatggtctggtacacatctcccagatcaccgacgctcgcgtgcagaac
gtggctgaccacctgaccatcggtgacgtggtcaaggtgaaggtactggaagtggaccgt
cagggccgcgtacgtctctccatcaaggaagcgaacgccccgaccgaagcagctgcacct
gctgctgacgccgctccggccgctgaagaagcgcctgctgcagagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system