KEGG   Aliivibrio wodanis: AWOD_I_0919
Entry
AWOD_I_0919       CDS       T03808                                 
Symbol
uvrB
Name
(GenBank) UvrABS system protein B (excinuclease ABC subunit B)
  KO
K03702  excinuclease ABC subunit B
Organism
awd  Aliivibrio wodanis
Pathway
awd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:awd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AWOD_I_0919 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:awd03400]
    AWOD_I_0919 (uvrB)
DNA repair and recombination proteins [BR:awd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AWOD_I_0919 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AWOD_I_0919 (uvrB)
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB UVR ResIII DEAD AAA_30 UB2H
Other DBs
NCBI-ProteinID: CED71012
UniProt: A0A090IL31
Position
1:1081539..1083569
AA seq 676 aa
MANTYELMSNYQPAGDQPQAIKTLNEGLENGLAHQTLLGVTGSGKTFTLANVIAKSGRPT
VIMAHNKTLAAQLYGEMKAFFPNNAVEYFVSYFDYYQPEAYVPTTDTFIEKDSSVNEHIE
QMRLSATKALLERKDAIIIASVSAIYGLGDPQAYLSMMLHLRRGDVVNQRDLLRRLAELQ
YKRNDMAFERGTFRVRGEVLDVFPAESEHEAIRIELFDDEVERISKFDPLTGSIITKDMP
RCTIYPKTHYVTPREKVLEAIDQIKVDLAERQKELLANNKLVEEQRITQRTQFDIEMMNE
LGFCSGIENYSRYLSGRPQGEAPPTLFDYLPKDGLLIIDESHITVSQIGAMYKGDRSRKE
NLVEYGFRLPSALDNRPMRFDEFEALAPQTIYVSATPGKYEIEKSGTDIAEQLVRPTGLL
DPIIEVRPVGTQVDDLLSEIRIRTKVGERVLVTTLTKRMAEDLTEYLAEHEVKVRYLHSD
IDTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTI
GRAARNLEGKAILYADKMTGSMEKAIGETERRREKQILHNKALGIVPTALKKDVADILEL
GDMTKNKRKVVAPKIKLSEVAEEGANYRSMTPQQLDKEVKKLETKMYQHAKDLEFELAAQ
VRDEIETLRGQFITNS
NT seq 2031 nt   +upstreamnt  +downstreamnt
atggccaatacgtatgaattaatgtctaattatcagccggcaggtgatcaacctcaagcg
ataaaaacgttgaatgaaggtttagagaatggtcttgctcatcaaacccttcttggagtg
actggttcaggaaaaacgttcacattagccaatgtgatagctaaatctggtcgtccgacg
gtgatcatggctcataacaagacattagcggctcagttatatggagaaatgaaagctttt
ttcccaaataatgccgttgaatattttgtgtcatactttgattattatcaaccagaagct
tatgtaccgaccacagatacctttattgaaaaagattcctcagtaaatgaacatatcgaa
caaatgcgtttatcagcaacgaaagctcttttagaacgtaaagacgcgattattattgct
tccgtttctgctatttatggtttaggtgaccctcaagcctatttaagcatgatgcttcat
ctacgacgtggagatgttgttaaccaaagagatcttttacgtcgcttagctgaactgcaa
tataaacgtaatgacatggcgtttgaacgaggtactttccgcgtccgtggtgaggtgttg
gacgtttttcctgctgagtccgagcatgaagcgattcgaattgaattgtttgatgatgag
gtagagcgtattagtaaatttgacccattaacgggctctattattacgaaagatatgcct
cgctgtactatttatcctaagacgcactacgtaacaccaagagaaaaggtacttgaagcg
attgatcaaataaaagtcgatctggctgaacgtcaaaaagaactactggcgaataataaa
ttagtagaagagcaacggattactcagcgtactcagtttgatattgaaatgatgaatgaa
ttaggtttttgttctggtatcgaaaactactctcgttatttaagtggtcgacctcaaggt
gaagcgccaccaacgttattcgattatttaccaaaagatggcttgttgatcattgatgag
tctcacattacagtctcccaaattggtgctatgtataaaggtgatcgctcacgtaaagaa
aacttggtggaatatggttttcgacttccatcagcattagataataggccaatgcgtttt
gacgaatttgaagcgttagctccacaaaccatttatgtttctgctactcctggtaagtat
gaaatagaaaaatcaggaacagatatcgcagagcaattggtaaggccaacaggtttactt
gatccaataattgaagtgcgtccagtcggaacacaagtagatgatcttttatctgaaata
cgaattagaacaaaagtgggagagcgtgtcttagttacaacattaactaagcgaatggca
gaagatttaaccgaatatcttgcagagcatgaggtcaaagtacgttatttacattcggat
attgatacggttgaacgtgtcgaaattattcgtgatttacgtttaggggagtttgatgta
cttgttggtatcaacttacttcgtgaaggtttagatatgcctgaggtgtctttggttgcg
attttagatgcagataaagaaggttttttacgttcagaacgctcattaattcaaacgata
ggtcgcgctgctcgtaatttggaaggcaaagcgattctttatgcagataaaatgacaggt
tcaatggaaaaagcgataggtgaaacagaaagacgacgtgaaaaacagatcttacacaat
aaagctttagggatagtacctacggcattgaaaaaagacgttgcggatattctagagtta
ggtgatatgactaagaacaaacgtaaagtagttgcacctaaaattaaactgtctgaggtt
gcagaagaaggtgcgaattatcgttctatgacgccacagcaattagataaagaagttaaa
aaattagaaacgaaaatgtatcaacatgcgaaagatttggaatttgaattggctgcacaa
gtgagagatgaaatagagactttaagagggcaattcataaccaatagttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (16)   

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