KEGG   Aliivibrio wodanis: AWOD_I_1825
Entry
AWOD_I_1825       CDS       T03808                                 
Symbol
rnd
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
awd  Aliivibrio wodanis
Brite
KEGG Orthology (KO) [BR:awd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:awd03016]
    AWOD_I_1825 (rnd)
Enzymes [BR:awd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     AWOD_I_1825 (rnd)
Transfer RNA biogenesis [BR:awd03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    AWOD_I_1825 (rnd)
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNAseD_HRDC_C HRDC
Other DBs
NCBI-ProteinID: CED71890
UniProt: A0A090IU16
Position
1:complement(2105406..2106530)
AA seq 374 aa
MEFEIVKQSQRLAEICQQASHKPFLMLDTEFVRTRTLYARLGLIQMFDGETLALVDPVEI
DDLTPLWDLLKNESVTKVLHACGEDLEVFQHYAGCMPTPMIDTQIMAAFLGYGLSTGFAK
LVSDYLGVDLDKGEARTDWMARPLSEKQLNYAAADVHYLLPMFEKLKAELAQTQWADAAY
QESALAVKKREKQPDAEKAYRDIKNAWQLNPKQLAILKMAAKWRLEEARKRDLAVNFVVH
ELSLWKLARFGLRSKEQMLKEGFDPREVQRHGSKLLRFTYLADDLDPAEYPKEISRLMDY
PGYKQIFKLLKDEVKLASEQSGLMPEFIASKKQLNQLLSWKWKKNCDPEQKPDVLQGWRG
ELVETRFMSVISES
NT seq 1125 nt   +upstreamnt  +downstreamnt
gtggaatttgaaatcgttaaacagagtcaacgtttagctgagatctgtcagcaagcaagt
cataaaccatttttaatgctagatactgaatttgtacgcacaagaacgttatatgcacgt
ttaggtttgattcaaatgtttgatggtgaaacattagcattggttgatccggttgaaatt
gatgatttaaccccactttgggatttattaaaaaacgaatcagtcactaaagtacttcat
gcctgtggtgaagatttagaagtattccaacactacgcaggttgtatgcctacacctatg
atagacactcaaattatggctgcattcttgggttatggtttatccacgggctttgcgaaa
ttggtgtcggattatttaggtgtagatctagataaaggtgaggctcgaacagattggatg
gcgcgtccattgtctgaaaaacagcttaactatgccgcagcagatgtgcattacttactg
cctatgtttgaaaagctaaaagcagaattagctcaaactcagtgggctgacgctgcgtat
caggagtctgcacttgcggtcaaaaaacgtgagaagcaacctgatgcagagaaagcatac
cgagacatcaaaaatgcatggcaattaaaccctaagcaactagctatattgaaaatggct
gcaaaatggcgtttagaagaagctagaaagcgcgatttagccgttaactttgtagtccat
gaattaagtttgtggaagttagcgcgttttggcttacgcagcaaagagcaaatgctaaaa
gagggctttgatccaagagaagttcaacgtcatggtagcaaactattacgctttacttat
ttagctgatgatttagatccagctgaatacccaaaagagatctctcgattaatggattac
ccaggttataagcagatttttaagctattgaaagatgaagtgaaattagcctcagagcaa
tcaggcttaatgccagagtttattgcttctaaaaaacagttgaaccaattattgtcttgg
aaatggaagaagaactgcgatccagagcaaaaacctgatgtattacaaggctggcgaggt
gaactagttgaaactcgttttatgtcggtgatttctgagagctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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