KEGG   Alloalcanivorax xenomutans: P40_19635
Entry
P40_19635         CDS       T04770                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
axe  Alloalcanivorax xenomutans
Pathway
axe03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:axe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    P40_19635 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:axe03021]
    P40_19635 (rho)
   03019 Messenger RNA biogenesis [BR:axe03019]
    P40_19635 (rho)
Transcription machinery [BR:axe03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     P40_19635 (rho)
Messenger RNA biogenesis [BR:axe03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     P40_19635 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_25 NACHT AAA_22 OB_RNB Spore_III_AA AAA Mor
Other DBs
NCBI-ProteinID: ARB47339
UniProt: A0A9Q3W318
Position
4272133..4273392
AA seq 419 aa
MNLTELKQKPIGELLDIAKELGLENLARTRKQDVIFSILKRAAKNGSDIYGDGVLEILQD
GFGFLRSAEGSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKDGERYFAMLKVNEIN
FDKPENAKNKILFENLTPLFPTERLVMEVGNGSTEDITARVIDLVAPIGKGQRGLIVAPP
KAGKTMLLQNIAHSIARNNPESHMIVLLIDERPEEVTEMSRTVRGEVVASTFDEPPARHV
QVAEMVIEKAKRLVEHKQDVIILLDSITRLARAYNTVQPSSGKVLTGGVDAHALEKPKRF
FGAARNIEEGGSLTILATALVETGSKMDEVIYEEFKGTGNMELHLDRKVSEKRVFPAINI
RKSGTRREERLVSEDELQKMWILRKVLHPMDEIGAMEFLLDRMKQTKTNLEFFESMKRK
NT seq 1260 nt   +upstreamnt  +downstreamnt
atgaatctgaccgaactgaagcagaagcctattggcgaactcctggacatcgccaaggaa
ctgggcctggaaaacctggcccgtacccgcaaacaagacgtcatcttctcgattctgaag
agagccgccaaaaacggctcggacatttacggcgacggcgtcttggagattcttcaggat
ggctttggctttctacgttccgccgaaggctcctatctggcgggaccggatgacatctat
gtgtctccaagccagattcgccgcttcaatctgcgcaccggcgataccatttccgggaag
atccggcctcccaaggatggcgaacgctatttcgccatgctcaaggtcaacgagatcaac
ttcgacaagccggaaaacgccaagaacaagattctgtttgaaaacctgacgccgctgttt
cccaccgagcggttggtcatggaagtgggcaacggctccaccgaggacatcaccgcccgg
gtgatcgatctggtggcaccgatcggcaaaggccaacgcggcctgatcgtggccccgccg
aaagctggtaaaaccatgctcctgcagaacatcgcccactccatcgcccgcaacaacccc
gaatcccacatgatcgtgctgctgatcgacgaacgtcccgaagaggtgacggagatgtcg
cgcacggtgcgcggtgaggtcgtggcctccaccttcgacgaaccgcccgctcgccacgtg
caggtggcggaaatggtgatcgaaaaggccaagcgtctggtcgagcacaagcaggacgtg
atcatcctgctggattccatcactcgcctggcgcgcgcctacaacaccgtgcagcccagc
tccggcaaggttctgaccggtggtgtggatgcccacgccctggagaaaccgaaacgtttc
ttcggcgccgcccggaacatcgaggaagggggcagcctgaccattctcgccaccgcgctg
gtggaaaccggttccaaaatggacgaggtgatctacgaggagttcaagggcaccggcaac
atggaactgcacctggaccgcaaggtatccgaaaagcgtgtattcccggccatcaacatc
aggaagtccggtacccgtcgcgaagagcggctggtcagcgaagacgaattacagaagatg
tggatcctgcgcaaagtgctgcatccgatggatgagatcggtgccatggagttcctgctg
gatcgcatgaaacagaccaagaccaatctggaattcttcgagtccatgaagcgcaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (19)   

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