KEGG   Amphibacillus xylanus: AXY_16170
Entry
AXY_16170         CDS       T02266                                 
Symbol
pdhD
Name
(GenBank) pyruvate dehydrogenase complex E3 component
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
axl  Amphibacillus xylanus
Pathway
axl00010  Glycolysis / Gluconeogenesis
axl00020  Citrate cycle (TCA cycle)
axl00260  Glycine, serine and threonine metabolism
axl00280  Valine, leucine and isoleucine degradation
axl00310  Lysine degradation
axl00380  Tryptophan metabolism
axl00620  Pyruvate metabolism
axl00630  Glyoxylate and dicarboxylate metabolism
axl00640  Propanoate metabolism
axl00785  Lipoic acid metabolism
axl01100  Metabolic pathways
axl01110  Biosynthesis of secondary metabolites
axl01120  Microbial metabolism in diverse environments
axl01200  Carbon metabolism
axl01210  2-Oxocarboxylic acid metabolism
axl01240  Biosynthesis of cofactors
Module
axl_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:axl00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    AXY_16170 (pdhD)
   00020 Citrate cycle (TCA cycle)
    AXY_16170 (pdhD)
   00620 Pyruvate metabolism
    AXY_16170 (pdhD)
   00630 Glyoxylate and dicarboxylate metabolism
    AXY_16170 (pdhD)
   00640 Propanoate metabolism
    AXY_16170 (pdhD)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    AXY_16170 (pdhD)
   00280 Valine, leucine and isoleucine degradation
    AXY_16170 (pdhD)
   00310 Lysine degradation
    AXY_16170 (pdhD)
   00380 Tryptophan metabolism
    AXY_16170 (pdhD)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    AXY_16170 (pdhD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:axl04147]
    AXY_16170 (pdhD)
Enzymes [BR:axl01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     AXY_16170 (pdhD)
Exosome [BR:axl04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   AXY_16170 (pdhD)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored GIDA FAD_binding_2 HI0933_like NAD_binding_8 3HCDH_N FAD_binding_3 AlaDh_PNT_C DAO UDPG_MGDP_dh_N Thi4
Other DBs
NCBI-ProteinID: BAM47749
UniProt: K0IZ49
Position
complement(1657067..1658473)
AA seq 468 aa
MVVGDFAIELDTLVVGAGPGGYVAAIRAAQTGQKVTIVDKGALGGVCLNVGCIPSKALIE
AGTRYSQAKNSEEMGIITKEVSVDFEKVQEWKAGIVNKLTSGVESLLKGNKVDIVKGEAY
FVDRNTVRIMDDKSSQTYTFKNCIIATGSTPIEIPSFKFSDRILDSTGALALKEIPKKLV
VIGGGYIGTELGAAYSDFGTEVTILEGASEILSGFEKDMTAVLKRNLKKKNVQIITNAMA
KSSEETDTGVKVTYEAKGKEETIEADYVLVTVGRYPNTREIGLEEVGIELDERGLVKIDK
QCRTNIDNIYAIGDIVAGPPLAHKASYEGKIAAEAIAGEKSEIDYNGIPAVMFAAPEIAS
VGYTEAEAKEAGFDVKASKFPFAANGRALSLGNTDGFVRLVTRKEDGLILGGQVVGANAS
DIISEIGLAVETGMTAEDLALTIHAHPTLGEVTMEAAEVATGRPIHIM
NT seq 1407 nt   +upstreamnt  +downstreamnt
atggtcgtaggagattttgcaattgaattagatacattagtagttggtgcgggacctggt
ggctatgtagctgccatccgcgctgctcaaacaggacaaaaagtaacaatagtagataaa
ggagcacttggtggtgtgtgcttaaacgttggctgtattccgtcaaaagctttgattgaa
gctggtacacgttatagccaagcgaagaactctgaagaaatgggtattatcactaaagaa
gtatcagttgactttgagaaagttcaagagtggaaagctggtattgttaacaagttaact
tcaggtgttgaaagcttattaaaaggtaataaagttgatattgttaaaggtgaagcatat
tttgtagatcgtaatactgttcgtattatggatgataaatcttcacaaacatacacattc
aaaaactgtataatcgcaacaggatctacaccaattgaaataccatcatttaaattctct
gatcgaatcttagactcaacaggtgctttagcacttaaagagattcctaagaaattggtt
gttatcggtggaggatatattggtactgaactaggtgcagcctattctgacttcggtaca
gaagtaacgattttagaaggtgcaagtgaaatcttaagtggttttgaaaaagatatgact
gcagttttaaaacgtaacttgaagaagaaaaatgttcaaatcattactaatgctatggct
aagagctctgaagaaacagatacaggagttaaagtcacatatgaagctaaaggtaaggaa
gagacaattgaagctgattatgttcttgtaactgtaggccgttatccaaatacgagagaa
attggtctggaagaagtaggtattgaattagatgaacgtggtctagtgaagattgataag
caatgccgtacaaatattgataacatctatgcgatcggtgatattgttgctggtccacca
ctagctcataaggcatcttatgaagggaaaattgctgcagaagcaatcgctggagaaaaa
tctgaaattgattacaatggtattccagcagttatgtttgctgctcctgaaattgcttca
gttggttatacagaagcagaagctaaagaagcaggatttgatgttaaagcatctaaattc
ccatttgcagctaatggtcgtgcattatcattaggtaatactgatggatttgtccgtcta
gttacacgtaaagaagatggactgatcttaggtggtcaagtggtaggtgcgaacgcaagt
gatattatttcagaaattggcttagcagttgaaacaggtatgacagctgaggacttagca
ttaacaatccatgctcacccaactttaggtgaagtgacaatggaagcagctgaagttgca
actggacgtccaattcatattatgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (23)   
   KEGG PATHWAY (16)   
   KEGG MODULE (7)   
Chemical substance (27)   
   KEGG COMPOUND (27)   
Chemical reaction (11)   
   KEGG ENZYME (1)   
   KEGG REACTION (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (87)   

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