KEGG   Achromobacter xylosoxidans A8: AXYL_04076
Entry
AXYL_04076        CDS       T01341                                 
Symbol
uvrD
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
axy  Achromobacter xylosoxidans A8
Pathway
axy03420  Nucleotide excision repair
axy03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:axy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AXYL_04076 (uvrD)
   03430 Mismatch repair
    AXYL_04076 (uvrD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:axy03400]
    AXYL_04076 (uvrD)
Enzymes [BR:axy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AXYL_04076 (uvrD)
DNA repair and recombination proteins [BR:axy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AXYL_04076 (uvrD)
   MMR (mismatch excision repair)
    Other MMR factors
     AXYL_04076 (uvrD)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PcrA_UvrD_tudor AAA_30 AAA_12 Viral_helicase1
Other DBs
NCBI-ProteinID: ADP17395
UniProt: E3HTV5
Position
complement(4353998..4356292)
AA seq 764 aa
MMLEKLNPEQRAAVTLEPQHALVLAGAGSGKTRVLTTRMAWLIQTGQASPFGLLAVTFTN
KAAREMLARMSAILPIDTRGLWIGTFHGLCNRMLRAHHRDAGLPQSFQILDVTDQLAAIK
RLMKANGVDDEKYPPRDVQRFINGAKEEGLRPADVEAYDAHRRRLIEIYQLYEAQCLREG
VVDFAELLLRAYELLSRNAPVREHYQRRFRHILVDEFQDTNTLQYKWLRLLAGGGAAIFA
VGDDDQSIYAFRGANVGNMADFERDYARGTVIRLEQNYRSFGHILDSANALIGHNTGRLG
KNLWTEQGDGEPVRVIEQPSDGMEAQWIVDEIRSLIREGSLRREIAVLYRSNAQSRVLEH
AIFSAGIPYKVYGGLRFFERQEIKHALAYLRLMANPHDDTSWMRVVNFPTRGIGARTLEQ
LGDAARAHDTSLYAAVALVPGKGGSNLAQFAQLIHRLIEETRDLPLPEMVEHMLEASGLN
AHYKAEREGAERLENLNELITAAAVFASEENYDGMPAGVVPEQDTASTLNAGVVDAPIVA
SDGLTPLAAFLSHAALEAGDNQAQQGQDAVQLMTVHAAKGLEFDAVFITGLEEGLFPHEN
SVLEASGLEEERRLMYVAITRARQRLYISLAQSRMLHGQTRYAMRSRFLDEIPEQHLKWL
SPKAGLAQVGGTGAGWGGGNRGDAFGRKPTNTIAPRQPRGVATGVTVGDKQYRVGQGVHH
ARFGDGTIVSLSGAGQDAQAEIQFRDVGAKTLALGIAKLDIVQG
NT seq 2295 nt   +upstreamnt  +downstreamnt
atgatgctagagaagctcaatcctgaacaacgcgccgcagtaacgttagaaccgcagcac
gccctggtcttggccggggcgggcagcggcaagacccgggtgctcaccacccgcatggcc
tggctgattcaaaccggccaggcctcgccttttgggctgctggcggtcacgttcaccaac
aaggcggcgcgcgagatgctcgcgcgcatgtcggccatcctgccgatcgatacgcgcggc
ctgtggatcggtaccttccacggtctgtgcaaccgcatgctgcgcgcgcatcaccgcgat
gccggcctgccgcagagcttccagatcctggacgtcaccgaccagctcgcggcgatcaag
cggctgatgaaggccaacggcgtcgacgacgaaaagtatcctccccgcgatgtgcagcgc
ttcatcaacggcgccaaggaagagggcctgcgtcccgccgacgtcgaagcctacgacgcc
catcgccgccgcctgatcgagatctaccaactctacgaggcccagtgcctgcgcgagggc
gtggtggacttcgccgagctgctgctgcgcgcctacgaactgctgtcgcgcaacgcgccc
gtgcgcgagcactaccagcgccgtttccgccacatcctggtcgacgagttccaggacacc
aacacgctgcaatacaagtggctgcgtctgttggccggcggtggcgccgcgatcttcgcg
gtgggcgacgacgaccagtccatctacgcgttccgcggcgccaacgtcggcaacatggcc
gacttcgagcgcgattacgcgcgcggcaccgtgatccgcctggagcagaactaccgttcc
tttggccacatcctggattcggccaacgcgctgatcggtcacaacaccggccggctgggc
aagaatctctggaccgagcagggcgacggcgagccggtgcgcgtcatcgagcagccgtcc
gacggcatggaagcgcagtggatcgtggacgagatccgctccctgatccgcgaaggcagc
ctgcgccgcgagatcgccgtgctctaccgcagcaacgcgcagtcgcgcgtgctggaacac
gccatcttttccgccggcattccctacaaggtctacggcggcctgcgctttttcgagcgc
caggaaatcaagcacgcgctggcctacctgcgcctgatggccaacccgcacgacgatacc
tcctggatgcgggtcgtcaactttcccacgcgcggcatcggcgcgcgcacgctggagcaa
ttgggcgacgccgcgcgcgcgcacgacaccagcctgtacgcggccgtggctctggtgccg
ggcaagggcggttccaacttggcgcagttcgcgcagctgatccatcgcctgatcgaagag
acccgcgacctgccgctgccggaaatggtcgagcacatgctcgaggccagcggcctgaac
gcgcactacaaggccgaacgcgaaggcgcggaacgtctggaaaacttgaatgaactgatc
acggccgcggccgtgttcgcgtccgaggaaaactacgacggcatgcccgctggcgtggtg
cccgaacaggacacggcctccacgctcaatgcgggcgtggtggacgcgcccattgtggcg
tccgacggcctgacgccgctggcggcgttcctgtcgcatgcggcgctggaagccggcgac
aaccaggcccaacagggccaggacgccgtgcaactcatgaccgtgcacgcggccaagggc
ctggagtttgacgccgtgttcatcaccggcctggaagaggggctgttcccgcacgagaac
agcgtcctggaagcttccggactggaagaagagcgccgcctcatgtacgtggccattacg
cgcgcgcgccagcgcctgtacatcagcctggcacaaagccggatgctgcatggccagacg
cgctacgcgatgcgttctcgcttcctggacgaaattccggaacagcacctgaagtggctg
tcgcccaaggccggtctggcccaggtcggcggcacgggcgcgggctggggtggcggcaat
cgtggcgacgctttcggacgcaagcccaccaataccattgcgccgcgtcaaccgcgtggc
gtcgctaccggtgtcacggtgggcgacaagcagtatcgtgtggggcagggcgtgcatcac
gcgcggttcggcgatggcacgatcgtgagcctgagcggagcagggcaggacgcccaggct
gaaatccagttccgcgacgtgggcgccaagaccttggcgctgggcatcgccaaactcgat
attgttcagggttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (32)   

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