KEGG   Azoarcus sp. KH32C: AZKH_3645
Entry
AZKH_3645         CDS       T02502                                 
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase protein
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
aza  Azoarcus sp. KH32C
Pathway
aza03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aza00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AZKH_3645 (recQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aza03019]
    AZKH_3645 (recQ)
   03400 DNA repair and recombination proteins [BR:aza03400]
    AZKH_3645 (recQ)
Enzymes [BR:aza01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AZKH_3645 (recQ)
Messenger RNA biogenesis [BR:aza03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     AZKH_3645 (recQ)
DNA repair and recombination proteins [BR:aza03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AZKH_3645 (recQ)
SSDB
Motif
Pfam: RQC HRDC DEAD Helicase_C RecQ_Zn_bind
Other DBs
NCBI-ProteinID: BAL25930
UniProt: H0Q491
Position
4043924..4045753
AA seq 609 aa
MQAMSNSIRPFPLHVLEHVFGYTAFRGEQEAIVTHVGAGGDALVLMPTGGGKSLCYQVPA
LLRSGTAVVVSPLIALMQDQVSALQEAGVAAAYLNSSQAQDESAAVERDLIEGRLDLLYV
APERLLTARLLGTLDRLHRDRRIALFAIDEAHCVSQWGHDFRPEYLQLSVLPERYPGVPR
IALTATADPETREEIAARLGLAEARRFVSSFDRPNIRYRMVDKDNPRNQLLAFIREDHEG
DAGIVYCLSRRKVEETAAWLEEQGIRSLPYHAGMPQDVRAANQNRFLREDGIVMVATIAF
GMGIDKPDVRFVAHLDLPRSIEGYYQETGRAGRDGLPSQAWMAWGAQDIVQQRRMIDESE
GNEDFKRRARARLDALVGLVETTACRRQHLLAHFGEEGQACGNCDNCLEPPRTWDATDAA
RKALSGVFRTGQRFGAGHVIDVLRGELTDKVRDWEHDKVSTFGIGAEMDEKTWRTLFRQL
VARGMLAVDHDRHNALTLTDLARPVLRGEAGFALRIVPEKKRSRRTRSNRLEILDGVPQT
LFDRLRAWRAATARERNVPAYVILHDATLREIALARPTSRTELSHISGIGDRKLDAYCEA
ILDEVRRVE
NT seq 1830 nt   +upstreamnt  +downstreamnt
atgcaggcgatgagcaattccatccgccctttccccctgcacgtcctggaacacgttttc
ggctacacggccttccgtggcgagcaggaggccatcgtgacgcatgtcggggcaggcggc
gatgcgctcgtactgatgcccacgggcggcgggaaatcgctgtgctaccaagtgccggcg
ctgctgcgctcgggcaccgcagtcgtcgtgtcgccgctgatcgcactgatgcaggatcag
gtgagcgccttgcaggaagcaggcgtcgccgcagcctatctcaactccagccaggcgcag
gacgaatccgccgccgtcgagcgcgacctcatcgaaggccggctcgacctgctgtacgtc
gcgcccgagcggctgctgacagcacgcctgctgggaacgctcgaccgcttgcaccgcgac
cggcgcatcgcgctcttcgcgatcgacgaggcacactgcgtctcgcagtgggggcacgac
ttccgaccggaatacctccagctctcggtgctgcccgagcgctatccgggcgtgccgcgc
attgcgctgaccgcgaccgccgatccggagacgcgcgaggagatcgccgcacgcctcgga
ctcgccgaagcgcgccgcttcgtgtcgagcttcgaccggcccaacatccgctaccggatg
gtcgacaaggacaacccgcgcaaccagctcctcgccttcatccgcgaggaccacgagggc
gacgccggcatcgtctattgcctgtcgcggcgcaaggtcgaggagaccgccgcgtggctg
gaggaacagggcatccgttccctgccctaccacgccggcatgccgcaggacgtgcgcgca
gcgaaccagaaccgcttcctgcgcgaagacggcatcgtgatggtcgcgacgatcgctttc
ggcatgggcatcgacaagccggatgtgcgcttcgtcgcccacctcgacctaccacgttcg
atcgaaggctactatcaggagacgggccgcgccggtcgtgacggattgccatcgcaggcg
tggatggcctggggcgcacaggacatcgtgcagcagcggcgcatgatcgacgaatcggaa
ggcaacgaggacttcaagcgccgcgcccgcgcacggctcgatgcgctggtcggcctcgtc
gaaaccaccgcctgccgccgccagcacctgctcgcgcatttcggcgaggaaggccaggcc
tgcggcaactgcgacaactgcctggaaccgccgcgcacctgggacgccacggacgccgcg
cgcaaggcgctctccggcgtgttccgcaccggccagcgcttcggcgccggccacgtgatc
gacgtgctgcgcggcgaactcacggacaaggtgcgcgactgggaacacgacaaggtcagc
accttcggcatcggcgccgagatggacgaaaagacctggcgcacgctgttccgccagctc
gtcgcgcgcggcatgctcgccgtcgaccacgaccgccacaatgcgctgacgctgaccgac
ctcgcgcgcccggtgctgcgcggggaggccggattcgcgctgcggattgtgccggaaaag
aagcgcagccgccgtacccgcagcaatcgcctggaaatcctcgacggcgtgccgcagacg
ctgttcgaccgcctgcgcgcgtggcgcgccgcgaccgcccgcgaacgcaacgtgccagcc
tacgtgatcctgcacgacgccacgctgcgcgagatcgccctcgcacggccgacctcgcgc
acggagctctcgcacatctcgggtatcggcgaccgcaagctggatgcctactgcgaagcg
atcctcgacgaagtccgtcgggtggagtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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