KEGG   Azorhizobium caulinodans: AZC_0230
Entry
AZC_0230          CDS       T00609                                 
Name
(GenBank) helicase
  KO
K17675  ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6]
Organism
azc  Azorhizobium caulinodans
Brite
KEGG Orthology (KO) [BR:azc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:azc03029]
    AZC_0230
Enzymes [BR:azc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     AZC_0230
Mitochondrial biogenesis [BR:azc03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    AZC_0230
SSDB
Motif
Pfam: Helicase_C DEAD AAA_22
Other DBs
NCBI-ProteinID: BAF86228
RhizoBase: AZC_0230
UniProt: A8IJ07
Position
272764..276420
AA seq 1218 aa
MIRMLPCRMSSSRLAGASGRRRALPTNGAGHALFLPKFGNRPRGTQNRARSGAALRFGRA
LFASCSWGLRRLSRFGTGRAEGNETGTVRLVRFGRPSFRPCSGHSGGSTGRVAFASRYGT
ELSPELPDPADRMDDVTKLAVLPPSIRARGVTAVLGPTNTGKTHLAIERMLGHESGLIGL
PLRLLAREVYQRVVERVGAKNVALITGEEKIKPKNPRYWVATVEAMPRDVDVAFVAIDEV
QLATDLDRGHVFTNRLLNRRGRFETMLLGSATMRPLIQKLMPGVTMVERPRLSTLMFAGE
KKISRLPRRSAIVAFSAEEVYSIAEFIRRQRGGAAVVMGALSPRTRNAQVELYQNGDVDY
LIATDAIGMGLNLDVDHVAFASDRKFDGWQFRRLNPMEMAQIAGRAGRAMRDGTFGTTGR
CPPLDQELVERLEAHDFENARVLQWRNAVPDYRTIRTLTDSLALPPREEGLTRAPTGDDV
QVLEIMSRDADVTARVTSPAVVERLWDVCQVPDYRKVSPGAHAELISTLFQYVGTGGRIP
DDWFARQIALTDRAEGDIDTLSSRIAQVRTLTFVANRPDWLGDPEHWQGVTRGVEDKLSD
ALHERLAQRFVDRRTSMLMRRLRENTMLETEISKTGDVTVEGHVIGHLQGFQFAPDPTAG
GEEAKALRAAAQKALAGEIETRANRLSQAVDEAFVLSHDGTVRWTGEPVAKLIPGDEVLK
PRFKIIADEHLTGPARDQVEARLTLWVNAHIEKLLGSLNKLATAEDITGIARGIAFQIVE
SLGVLERTKVAEEMKTLDQTARATLRGYGVRFGAHHIYLPALLKPAPRTLAAQLYALKHG
GLQQKGLDELPHLAASGRTSIPVDHEIQKGLYRAVGFRVCGERAVRVDILERLADLIRPA
LAWRPNSPGPKPPGAVDGRGFTVTVGMTSLAGCSGEDFASILKSLGYRMERRAAPPPEAD
TAAVTEAAPAPEAAEPLTPAPEGAIEADLLFEASEAPAPVEAHEDASHEDAPHEEHDALV
EEVAEAAETEAVIAESADPTAAESAEEVGAVEAPAAGDATPAEAAEAVAGEANPEEPALI
EVWRPGRPPGAPRREGAPGQKREGRGDNRGGERRDGRPGGQRRNGPPGDRPGQGHRPPRP
EGEGEAAAQGERQGNRPPRSERFRVPQGDAPRGPRPERHGGGAPQQQDRRREKQADPDSP
FAALAALKARLEAEKKGK
NT seq 3657 nt   +upstreamnt  +downstreamnt
atgatcaggatgcttccgtgccgcatgtcgtcctcccgtctcgccggcgcgtctggtcga
cggcgcgccctgccaaccaacggggccgggcatgccttgttcctgccaaagtttggcaac
cggccgcgaggaacgcagaacagagcgcgatccggggcggcgctccgattcggacgggct
ttgttcgcgtcgtgttcgtggggcttgcgccggctgtcccgtttcgggacgggcagggcg
gaggggaacgaaaccggcaccgtccgcctcgtccgattcgggcgcccttcgttccgcccc
tgttccggccattcgggcggcagcactggacgtgtcgcctttgcgtcccgatatggtaca
gagctgtcccccgagctgccggaccccgccgaccgaatggatgacgtcaccaagcttgcc
gtgctgccgccgtccatcagggcgcggggcgtcacggccgtgctcggccccaccaacacc
ggcaagacccacctcgccatcgagcgcatgctgggacacgagagcggcctcatcggcctg
ccgctccggctgctggcgcgcgaggtctatcagcgggtggtggagcgggtgggcgccaaa
aacgtggcgctcatcaccggtgaagagaagatcaagccgaagaacccgcgctactgggtg
gccaccgtcgaggccatgccgcgcgacgtggatgtggccttcgtagccatcgacgaggtg
cagctcgccaccgatctcgatcgcggccatgtcttcaccaaccggctgctgaaccggcgc
ggccgcttcgagaccatgctgctgggctcggccaccatgcggccgctgatccagaagctc
atgcccggcgtcaccatggtggagcggccccgcctctcgaccctgatgtttgccggcgag
aagaagatttcccgcctgccgcgccgctcggccatcgtcgccttctcggcggaggaggtc
tattccatcgccgaattcatccgccgccagcggggcggggcggcggtggtgatgggggcg
ctctcgccccgcacccgcaatgcgcaggtggagctctaccagaacggcgatgtggattat
ctcatcgccaccgacgccatcggcatgggcctcaatctcgacgtggaccatgtggccttc
gcctcggaccggaagttcgacggctggcagttccgccgcctcaaccccatggagatggcg
cagatcgcgggccgcgccggccgggccatgcgcgatggcaccttcggcaccacgggccgc
tgcccgcccctcgaccaggaattggtggagcggctggaggctcacgatttcgagaacgca
cgggtgttgcagtggcgcaacgccgtgccggactaccggaccatccgcacgctgacggac
agcctcgcgctcccgccgcgggaggaggggctgacccgcgcacccaccggcgacgacgtg
caggtgctggaaatcatgagccgcgacgcggacgtgacggcccgcgtgacctcacctgcg
gtggtggagcggctgtgggacgtctgccaggtgcccgattatcggaaagtttccccaggc
gcccatgcggagctgatttccacgctttttcagtatgtcgggaccggtggtcgcatcccc
gacgactggttcgcgcgtcaaatcgccttgaccgatcgcgcggaaggagacatcgacacg
ctgtcgagccggatcgcgcaggtgagaaccctcaccttcgtagccaaccggcccgattgg
ctaggggacccggagcactggcaaggcgtcacaagaggggtcgaagacaagctgtccgac
gcgcttcacgaacgattggcacaacgtttcgtggaccgccggaccagcatgctcatgcga
cgcctgcgagagaacacgatgctcgagactgagatcagcaagaccggcgatgttaccgtg
gaaggccatgtgatcggccatctccagggattccagttcgcaccagaccccaccgccggc
ggggaagaggccaaggccctgcgcgccgccgcgcagaaggcactggccggggagatcgag
acccgcgccaaccgcctgtcgcaggcggtggacgaggcgttcgtgctcagccatgacggc
accgtccgctggacgggtgagccggtggccaagctcatccccggcgacgaggtgctgaag
ccccgcttcaagatcatcgccgacgagcatctgaccggccccgctcgcgatcaggtggag
gcgcgcctcacgctgtgggtgaacgcccacatcgagaagctgctcggctccctgaacaag
ctcgccaccgccgaggacatcaccggcatcgcccgcggcatcgccttccagatcgtcgag
tccctcggcgtgctggagcgcaccaaggtggccgaggagatgaagaccctcgaccagacc
gcccgcgccacgctgcgcggctatggcgtgcggttcggtgcccatcacatctatctgccc
gcgctcctgaagccggccccgcgcacgctggcggcgcagctctatgcgctgaagcatggc
ggcctgcagcagaagggcctcgacgagctgccgcatctggcggcgagcgggcgcacctcc
attcccgtggatcacgagatccagaagggcctctaccgggccgtcggcttccgcgtctgc
ggcgagcgggcggtgcgcgtggacattctggagcgtctcgccgacctcatccgcccggcg
ctggcctggcggccgaactcccccggccccaagccgccgggtgccgtggacggtcgcggc
ttcaccgtgacggtgggcatgacttcgctcgccggctgctctggcgaggacttcgcctcg
atcctgaagtcgctcggctatcgcatggagcgccgtgcggccccgccgccggaggccgat
accgccgccgtgaccgaggctgcgcccgcgccggaagcggccgagccgctgacgccggcg
ccggaaggcgccatcgaggcggacctgctgttcgaggcctccgaggctccggctccggtt
gaggcgcatgaagatgcgtcccatgaggacgccccgcacgaggagcacgacgcgctggtg
gaagaggtggcggaagccgccgagaccgaggcggtgatcgcggagagcgccgatcccacc
gctgccgagagcgcagaggaagtcggcgccgtggaagcccccgccgccggtgacgcgacc
cccgccgaggcggcggaagccgtggccggcgaggcgaatcccgaagagccggccctcatc
gaggtgtggcgtccgggccgtccgccgggtgcgccgcgccgcgaaggcgcgccgggccag
aagcgcgagggtcgcggggacaatcgtggcggcgaacgccgcgacggtcgccccggtggc
cagcgccgcaacgggcctcccggcgatcgccccggccagggccaccgtccgccgcgtccg
gaaggcgagggcgaggcggcggcgcagggcgagcggcagggcaaccgcccgccgcgcagc
gagcgcttccgcgtgccgcagggcgatgcgccccgcgggccgcgtcccgaacgccatggc
ggcggtgccccgcagcagcaggatcgccgccgcgagaagcaggccgatccggacagcccg
ttcgctgccctcgccgccctgaaggcgcggctggaggcggagaagaagggcaagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (99)   
   KEGG ORTHOLOGY (1)   
   RefGene (95)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (107)   

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