KEGG T03461: DK49

Brucella abortus 63 75: DK49_1750

Entry

DK49_1750         CDS       T03461

Symbol

gidA

Name

(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA

K03495

tRNA uridine 5-carboxymethylaminomethyl modification enzyme

Organism

babt Brucella abortus 63 75

Brite

KEGG Orthology (KO) [BR:babt00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:babt03016]
    DK49_1750 (gidA)
   03036 Chromosome and associated proteins [BR:babt03036]
    DK49_1750 (gidA)
Transfer RNA biogenesis [BR:babt03016]
Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    DK49_1750 (gidA)
Prokaryotic type
    DK49_1750 (gidA)
Chromosome and associated proteins [BR:babt03036]
Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    DK49_1750 (gidA)

SSDB

Motif

Pfam:

GIDA GIDA_C GIDA_C_1st FAD_oxidored Pyr_redox FAD_binding_2 Pyr_redox_2 HI0933_like AlaDh_PNT_C NAD_binding_9 Lycopene_cycl Pyr_redox_3 DAO FAD_binding_3

Other DBs

NCBI-ProteinID:

AIJ80901

Position

1:complement(1767507..1769417)

AA seq 636 aa
MSSAEALAFDVIVIGGGHAGCEAASAAARAGARTALVTHRFDTIGVMSCNPAIGGLGKGH
LVREIDALDGLMGRVADRAGIQFRLLNRRKGPAVRGPRTQADRKLYRLAMQQMITEQENL
TVVEGGAADLVCDGERISGVTLADGRVLKCGAVVLTTGTFLNGLIHIGEKRFPAGRMGEK
PALGLSERLLSFGFTLGRLKTGTPPRLDGRTIDWQSLDMQSADEEPVPFSLMTDRITTPQ
IECGITRTTPETHDIIRANLHRSAMYSGSIEGIGPRYCPSVEDKIVKFGDRDGHQIFLEP
EGLDDDTVYPNGISTSLPEDVQLEILKTIPGLEKAVLLQPGYAIEYDFIDPRELKRSLET
RKVCGLFLAGQINGTTGYEEAGAQGLLAGLNAARRAAGSEPVILQRTEAYIGVMVDDLTS
RGVSEPYRMFTSRAEFRLSLRADNADQRLTPLADEVGILSEERRKRYLTRETALSHARMV
TQSLSITPNLAGYYDLRLNQDGVRRSAYDLLSYPDINLDRLIAIWPELASIDPVTREALE
IEAQYAVYMERQQSDIAVMEREERLLIPSGLDFDAISGLSNELKQKLKQRKPETIAEAQR
VDGMTPAAVALLIAQIRKFGGRQKLAAETLEGKGAA

NT seq 1911 nt +upstreamnt +downstreamnt
atgagttcggccgaagctcttgcctttgatgtcattgtaattggtggtggccatgcgggc
tgcgaagccgcttccgctgccgcgcgtgcgggcgcgcgcacggcgcttgttacgcatcgt
tttgatacgatcggggtcatgtcctgtaacccggcgattggcgggctgggaaaaggccat
cttgttcgtgaaatcgatgcccttgatggcctgatggggcgcgtggctgatagagcaggc
atccagtttcgcttgctcaatcggcgcaagggcccggcggtgcgagggcctcgtacgcag
gctgatcgcaagctttatcgtctggccatgcagcaaatgatcacggaacaggagaacctc
accgttgttgagggtggtgctgctgatcttgtctgcgatggcgaacgaatttccggtgtc
actcttgcggatggtcgcgttttgaaatgtggtgccgtggttctcacaacaggcacgttt
cttaacggccttattcatataggcgaaaagaggtttccagccggccgtatgggggaaaag
cccgccctgggtctttccgaacgcttgctttcctttggcttcacgcttgggcgtcttaaa
accggcacaccgccgcgtcttgatggtcgcacaatcgactggcagagtctcgatatgcaa
tcggcagatgaggagcctgttccgttctcgcttatgacggatcgcatcaccacgccgcag
atcgagtgtggtattacccgcaccacgccagaaacgcacgatatcatccgggcgaatctg
caccgctcagccatgtattccggcagtatcgaagggatcgggccgcgctattgtccgtct
gtcgaggataagatcgtcaagttcggcgaccgtgatggtcaccagatattcctggagccg
gaagggcttgatgacgatacggtttaccccaacggcatctcgacctcgctgccggaagat
gtgcagcttgaaattttgaagaccatacccggtctggaaaaggcagtgctgctccagccg
ggctatgccattgaatatgactttatcgatccgcgcgagttgaagcgcagccttgaaacg
cgcaaggtctgcggtctttttctggccgggcagatcaatggcacgacaggatatgaggag
gcgggcgctcaagggttgctggccgggcttaatgcggcgcgccgtgcggcagggagtgag
cctgtcatactccagcgaacggaagcctatattggtgtgatggtggatgatctgacgtct
cgcggcgtgagcgaaccctatcgcatgtttacgtcgcgagccgagttccggctttcgctg
cgtgctgataatgccgatcagcggttgaccccccttgctgatgaagttggaatcttgagc
gaagagcgtcgtaaacgctatttaacgcgtgagactgcattatctcatgcgcgcatggtg
acgcaatcgctgtcgattacccccaatcttgccgggtattatgatctgcggctcaatcag
gacggtgttcgccgctccgcctatgatctgctttcctatcccgatatcaatctggaccgc
ctgatcgccatctggccggaactggcatcgatcgatcccgtcacgcgggaagcacttgag
attgaagcccaatatgcggtctatatggagcggcagcagagtgatattgccgtcatggaa
cgggaagagcggctgcttataccgtcggggcttgattttgatgccatctccgggctttcc
aatgaattgaagcaaaagctgaagcagaggaagccggaaacgattgcggaagcgcagcgc
gtcgatgggatgaccccggccgcggtggctttattgatcgcgcagatcagaaaattcggc
ggcaggcagaaactggctgccgaaacgctggaaggcaagggcgcagcatga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (14)   
   Pfam (14)   
All databases (30)   

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