KEGG   Burkholderia ambifaria MC40-6: BamMC406_1695
Entry
BamMC406_1695     CDS       T00684                                 
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
bac  Burkholderia ambifaria MC40-6
Brite
KEGG Orthology (KO) [BR:bac00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bac03009]
    BamMC406_1695
Enzymes [BR:bac01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     BamMC406_1695
Ribosome biogenesis [BR:bac03009]
 Prokaryotic type
  ribosomal protein modification factors
   BamMC406_1695
SSDB
Motif
Pfam: Radical_SAM TRAM_2 UPF0004 TRAM CLP1_P
Other DBs
NCBI-ProteinID: ACB64181
UniProt: B1YR17
Position
1:complement(1893718..1895079)
AA seq 453 aa
MSQSPKVGFVSLGCPKALVDSEQIITQLRAEGYEISGTYDGADLVVVNTCGFIDEAVQES
LDAIGEALTENGKVIVTGCLGAKSSASGSNLIEEVHPKVLAVTGPHAVGEVMQAVHSHLP
KPHDPFVDLVPAAGIKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVAEVMLEAE
NLFKSGVKELLVISQDTSAYGVDVKYRTGFWNGKPIKTRMTDLVAALGELAAQYGAWVRL
HYVYPYPSVDEVIPLMAEGPFKGHVLPYLDVPFQHAHPEVLKRMKRPANAEKVLERVQKW
REICPDLTIRSTFIAGFPGETEEQFETLLDFIREAELDRVGCFAYSPVEGATANELDGAL
PDDVREARRARFMEVAEEVSAQRIQRKVGKTLKVLIDEVSAEGGIGRTAADAPEIDGVVY
VEPATKASKRYKVGDFVSVKITGADGHDLWGEV
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgtcccagtcccccaaagtaggcttcgtatcgctcgggtgcccgaaagccctcgtcgac
tccgaacaaatcatcacgcagctgcgcgccgaaggttatgaaatctccggcacgtacgac
ggcgccgacctggtcgtcgtcaacacctgcggtttcatcgacgaagcggtgcaggaaagc
ctcgatgcaatcggcgaagcgctgaccgagaacggcaaggtgatcgtcaccggctgcctc
ggcgcgaagtccagcgcgagcggttcgaacctcatcgaggaagtccatccgaaggtgctc
gccgtcaccggcccgcacgcggtgggcgaagtgatgcaggccgtgcattcgcacctgccg
aagccgcacgacccgttcgtcgatctcgtgccggccgccggcatcaagctcacgccgcgc
cactacgcatacctgaagatctccgaaggctgcaaccaccgctgcacgttctgcatcatc
ccgtcgatgcgcggcgatctcgtatcgcgtccggtcgccgaggtgatgctcgaggcggag
aacctgttcaagtcgggcgtgaaggaactgctggtgatctcgcaggacacgagcgcatac
ggcgtcgacgtgaagtaccgcacgggcttctggaacggcaagccgatcaagacgcgcatg
accgacctggtcgccgcgctcggcgaactcgccgcgcagtacggtgcatgggtgcgcttg
cactacgtgtatccgtatccgagcgtcgacgaagtcattccgctgatggccgaaggcccg
ttcaagggccacgtgctgccgtatctcgacgtgccgttccagcacgcgcatccggaagtg
ctcaagcgcatgaagcgcccggccaacgcggagaaggtgctcgagcgcgtgcagaagtgg
cgcgagatctgcccggacctgacgatccgcagcacgttcatcgccggcttccccggcgag
acggaggagcagttcgaaacgctgctcgacttcatccgcgaagcggaactcgatcgcgtc
ggctgctttgcgtattcgccggtcgaaggcgcgaccgcgaacgaactggacggcgcgctg
ccggacgacgttcgcgaagcacgccgcgcgcgcttcatggaagtcgccgaggaagtgtcg
gcgcagcgcatccagcgcaaggtcggcaagaccctcaaggtgctgatcgacgaagtcagc
gcagaaggcggcatcggccgcacggcggcggatgcgccggagatcgacggcgtcgtctac
gtcgagccggcgacgaaggcgtcgaagcgctacaaggtcggcgacttcgtgtcggtgaag
atcacgggcgcggacggccacgacctgtggggcgaggtttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (5)   
   Pfam (5)   
All databases (25)   

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