KEGG   Bifidobacterium actinocoloniiforme: AB656_02755
Entry
AB656_02755       CDS       T04036                                 
Name
(GenBank) DNA topoisomerase IV subunit A
  KO
K02469  DNA gyrase subunit A [EC:5.6.2.2]
Organism
bact  Bifidobacterium actinocoloniiforme
Brite
KEGG Orthology (KO) [BR:bact00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bact03032]
    AB656_02755
   03400 DNA repair and recombination proteins [BR:bact03400]
    AB656_02755
Enzymes [BR:bact01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     AB656_02755
DNA replication proteins [BR:bact03032]
 Prokaryotic type
  DNA Topoisomerases
   AB656_02755
DNA repair and recombination proteins [BR:bact03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      AB656_02755
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C Inp1 PDDEXK_1
Other DBs
NCBI-ProteinID: AKV55329
UniProt: A0A086Z0S8
Position
681384..684002
AA seq 872 aa
MASHRKSNPGYDMRQIKEHIVETPLGEEMSKSFLEYAYSVIYARALPDARDGLKPVQRRI
IYQMGQMGLTPDKPYMKSARAVGEVMGKLHPHGDSSIYEAMVRLAQPFAMRLPLVDGHGN
FGSLDDGPAASRYTEARLASAALGMNADIDEDTVDFTPNYDNKLKEPTVLPSAIPNLLVN
GSSGIAVGMATNMITHNLGEVVAAAKHLMTHPQASLDELMTYLPGPDLPGGGVIVGREGI
RQAYESGRGAFVTRSVTHTENVTARKKAIVVTELPFMVGPERVLERISEGVKNHRIEGIS
GAIDLTDRHNGTRLVIELKSGFDPAKVLAQLFKYTPLEDSFTINNVALVDGRPHTMGLKE
LLEVWIKHRRQVVHRRSKYRKQRAQERLHLVEGLLLAMIDIDEVIQVIRTSEDADTAKTR
LMAVFDLDEVQAKYILELRLRRLTKMSRIELEGERDELKEQLEALELILSSAAELDKVVV
DEMDQAVQAWGSPRRTVILDAEPSGDLEPVALQGGSDPKLTQGERTSDLGLATVSAKAAS
TADPVAMQVKDEPCTLLLSASGLIARSGEGALDLWRARSAADGRADDDQIVSIFVTHTLA
DYALVTSAGRLVTAPVADLPQVPMTTSLSLAGGVRADELIGGTHSTSPVEGERTVAAIDL
SDQRPLGLGTRQGVVKRWNRVSPSTMDSWSIIDLKEGDSLLFAAPAADDDRMVLISSDSC
LLTYEAAKVRPQGRTSAGMTGIRLAEGRKVAAFAVVPAGQVSWTYREGENGLTSQSGAVV
LTVAGSGEALPGTENGAAKVTPLQMYPVKGRGTGGVRSQRFLKGQDQLILACVGPWPLRA
STASGRPVDLPDVDMRRDASGQDLAAPIAYVA
NT seq 2619 nt   +upstreamnt  +downstreamnt
atggcatcgcatcgcaagagcaaccccgggtacgacatgcggcagatcaaggaacacatc
gttgaaacgcccctgggcgaggagatgagcaaatccttcctggagtatgcctactcggtc
atctacgcccgggccctgccggacgcccgggatggattgaagccggtccagcgccgcatc
atctaccagatgggccagatggggctcacgcccgacaagccttacatgaagtccgcacgc
gccgtcggcgaggtgatgggtaagctccacccccacggcgattcctcgatttacgaggcg
atggtccgcctcgcccagcctttcgccatgcgtttacccctggtggatggccatggcaac
ttcggctccctcgacgacggccctgcggcctcccgttacaccgaggcccgcctggcgtcc
gcagcgctcggcatgaatgccgatatcgacgaggatacggtcgatttcactcctaactac
gacaacaaactcaaagagccgaccgtcttgccctcggccatccccaacctgctggtcaac
ggttcctccggcatcgccgtgggcatggccaccaacatgatcacccataacctgggcgaa
gtggtcgcggcggccaagcacctaatgacccacccgcaggccagcttggatgagctgatg
acctacctgcctggacccgacctgcccggcgggggcgtgatcgtggggcgcgagggcatc
cgtcaggcctacgagagcggccgcggcgctttcgtgacccgctccgtgacccataccgag
aacgtgaccgcccgcaagaaggccatcgtcgtgaccgaactgccgttcatggtgggaccc
gagcgggttctggagcgcatctccgagggggtcaagaaccaccggatcgaggggatctcc
ggcgcgattgacctgaccgaccggcacaacggcacccggttggtcattgagctcaaatcc
ggtttcgacccagccaaggtactggcccagctcttcaagtacacccccttggaggactcc
ttcacaatcaacaacgtggcacttgtggatggccgcccccacacgatgggtctgaaggaa
ctccttgaggtctggatcaagcaccgccgtcaggtcgtgcaccgccgatccaagtaccgt
aagcagcgcgcccaggagcgcctgcatctggtggagggcctgctcctggccatgatcgac
attgatgaggtcatccaggtgattcgcacctcggaggatgccgacacggccaagacacgc
ctgatggcggtcttcgacctggacgaggtccaggccaaatacatcctggagctccgtttg
cgccgactgaccaagatgagccgaatcgagttggagggcgagcgcgacgaactcaaagag
cagctggaggccctggagctgattctgagttccgccgccgaactcgacaaagtggtggta
gacgagatggaccaggcggtccaggcctggggcagcccacggcgcaccgtcatcctggac
gcggagccttccggcgatctggagcccgtggcccttcaaggcgggtccgatcccaagctc
acccagggcgaacgaacctccgacctgggcttggccacggtcagcgcaaaggccgcttcg
accgcggacccggtcgcaatgcaggtcaaggacgagccctgcaccctcctgctgagcgcg
tccggcttgatcgcccgctcaggcgagggggcccttgacctatggcgcgcccgatccgca
gccgatggacgggcagacgacgatcaaatcgtctccatcttcgtcacccacacgctggcc
gactatgcattggtcacatcagctggccgtctggtcacggcaccggtggccgacctgccc
caggtgcccatgaccacctcgctgagcctggcaggcggagtgcgcgccgatgagctcatt
ggcggcactcattcgaccagcccggtcgagggtgaacgcactgtggccgcgattgacctg
tccgaccaacgcccgctagggcttggcacccggcaaggcgtggtcaagcgttggaaccgc
gtctcccccagcacgatggattcctggtcgattatcgacctgaaggagggcgacagtctc
ctgttcgcggctccagcggccgatgacgaccgcatggtcctcatctcctccgactcctgc
ctgctcacttacgaggccgccaaggttcgcccgcaaggtaggacttctgctggcatgacc
ggcatccgtctggccgagggccgcaaggtggccgccttcgcggtcgtgcccgcggggcag
gtctcctggacctatcgcgagggagagaacggcttaaccagccagtccggggccgtggtc
ctgactgtggcgggttcgggcgaggccctgccgggcactgagaacggcgccgctaaagtc
acccccctgcagatgtacccggtcaaggggcgcggcaccggcggcgtgcgctcccagcgt
ttcctcaaggggcaggaccagttgatcctggcctgcgtaggcccctggcccctgcgcgct
tcgaccgcctcgggccgtccggtcgacctacctgacgtggatatgcgccgtgatgcttca
ggacaggacctggcggcgccaatcgcctacgtcgcttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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