KEGG   Bacillus sp. YP1: QF06_20555
Entry
QF06_20555        CDS       T03701                                 
Name
(GenBank) hypothetical protein
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bacy  Bacillus sp. YP1
Pathway
bacy03410  Base excision repair
bacy03430  Mismatch repair
bacy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bacy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    QF06_20555
   03430 Mismatch repair
    QF06_20555
   03440 Homologous recombination
    QF06_20555
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bacy03400]
    QF06_20555
DNA repair and recombination proteins [BR:bacy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     QF06_20555
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     QF06_20555
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      QF06_20555
SSDB
Motif
Pfam: DHH DHHA1 RecJ_OB Lactamase_B_6
Other DBs
NCBI-ProteinID: AJO60852
Position
pBUYP1:57577..59331
AA seq 584 aa
MKIKQISSYNGDIIDTILKNRNIKDIDTFLNPNSSEDLNPFDLHNIELGANVLLAHLLIN
DHIGILVDADADGFSSASIIYQYIKKIEPDSHVSYFLHDRKAHGLTDEISQKIADSSIDL
IIIPDAASNDVDELQRLYYMGIDIIVLDHHEVDKMPTHGILINNQLDENKSTNKNLVGAG
MAYKFCQALDRILDTHYADDLLDLVAIGQIGDTSDISENEVRNLVFRGLETINNPLVKVA
VMDVFGSLEGIAPKDLSFSIIPMINAVVRVGTEDEKDLLFRALNKIGDGRVWNVEKRKKN
KKTGKFDKILVEQDLYEYAFDMMKKVKGRQNSMIKKSLEKLRSSTYNEGGISIALLDSSD
EAAITGLVANKVAKKYQKPALVLYYKDKKYIGSGRGNEKVLSSLKDWCNETGLVEFAQGH
ANAFGISIPEDNFEEFKKRTHEVEQNEFVYEVDLIVKENVDRSLIEDVTDNKHLFGGKVQ
EPLLAFVGIKINKNFIRQKGSMLTFYENGVEFVMYGAPEGLYESLKNNFDRQITMDFVGT
PSVNVYGNKRTLQLVLVDCERNESGQYDFIIEVPDEITAETIIF
NT seq 1755 nt   +upstreamnt  +downstreamnt
atgaagattaaacaaatcagttcttacaatggagacatcatcgacaccatattgaagaat
agaaatattaaggatattgatacattccttaatcctaacagcagcgaggatcttaatcct
tttgatcttcataatattgaactaggcgcgaatgtacttcttgctcatttgcttataaac
gaccacatcggtattttagttgatgctgacgctgatggattctcgtctgcatcaataatc
tatcaatatataaaaaaaatcgaaccagattcgcatgtttcatattttcttcatgatcga
aaagctcatggattaaccgatgaaatttctcaaaagattgctgactcatcaatagattta
attattattcctgatgcagcgtctaatgatgttgatgaacttcaaaggctttattacatg
ggaattgacattatcgtcctagatcaccatgaagtagataagatgccgacgcacggaatt
ttaattaataaccaattagacgagaataaaagcactaataagaatttagttggtgcaggt
atggcctataagttttgccaggccttagataggattttagatactcattatgcagatgat
ctactcgacttagttgctatcggtcaaattggagatacttcagatataagtgaaaatgag
gtcagaaatctagtcttccgtggtcttgagacaatcaataatcctctggttaaagttgct
gtaatggatgttttcggaagcctagaaggcattgcaccaaaagatctctctttctctatc
attccaatgattaatgctgttgttcgtgttgggactgaagatgaaaaagacctgctgttc
agagccttaaataagatcggtgatggacgagtttggaatgtagagaaacggaagaaaaat
aaaaagaccggaaaattcgataagatattagttgagcaagatctatatgaatatgccttt
gatatgatgaaaaaagttaagggccgtcagaactcaatgattaaaaagtctttagaaaaa
cttagaagcagtacatacaatgaaggtggaatttcaattgctttacttgattcttccgat
gaagctgcgattaccggtttagtcgctaataaagttgcgaaaaaatatcagaagccggct
ttagtgctctattataaagataagaaatatattggatcgggacgtggaaatgaaaaagtt
ttgtcttctcttaaagactggtgcaatgaaactggcttagttgagtttgctcaaggacat
gccaatgcttttggtatttctatccctgaagataactttgaggagttcaaaaaaagaaca
catgaagttgagcagaatgagtttgtttatgaggttgacctcatagtaaaggaaaacgtt
gatcggtctctaattgaagatgttactgataataaacacttatttggtgggaaagttcaa
gaacccctactggcctttgtcggaattaaaattaataagaactttatccgtcaaaaaggt
tccatgttaaccttttatgagaatggtgttgagtttgttatgtacggagcacccgaagga
ttatatgagagtcttaaaaataatttcgacaggcaaatcacgatggatttcgttggtacc
ccatctgtgaacgtttatggtaataaacgaactcttcaattagtattggttgactgtgaa
agaaatgaatctggccaatatgattttattattgaggtacctgacgaaattaccgcagaa
actattattttttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system