KEGG   Burkholderia ambifaria AMMD: Bamb_0954
Entry
Bamb_0954         CDS       T00398                                 
Name
(GenBank) Exonuclease, RNase T and DNA polymerase III
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
bam  Burkholderia ambifaria AMMD
Brite
KEGG Orthology (KO) [BR:bam00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bam03019]
    Bamb_0954
   03009 Ribosome biogenesis [BR:bam03009]
    Bamb_0954
Messenger RNA biogenesis [BR:bam03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Bamb_0954
Ribosome biogenesis [BR:bam03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    Bamb_0954
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: ABI86513
UniProt: Q0BH60
Position
1:1044642..1045262
AA seq 206 aa
MTDTAASASQPALVRNELNLVWLDMEMTGLDPDNDRIIEIAVVVTNSTLDIAVEGPVFAI
HQSDETLAKMDDWNKSTHGRSGLIDRVRASTVTEADAAAQLQAFLAQYVSPGKSPMCGNS
ICQDRRFMARWMPEFERFFHYRNLDVSTLKELCRRWQPAIYKGFQKRAMHTALADIHESI
DELKYYRQHFLIPAASAPAGESAPAA
NT seq 621 nt   +upstreamnt  +downstreamnt
atgaccgataccgccgcttccgccagccagcccgcgctcgtgcgcaacgagttgaacctc
gtctggctcgacatggagatgacgggcctcgacccggataacgaccgcatcatcgaaatc
gcggtcgtcgtgaccaattccaccctcgacatcgcggtggaaggccccgtgttcgcgatc
caccagagcgacgaaacgctcgcgaagatggacgactggaacaagtcgacgcacggccgt
tcggggctgatcgatcgcgtgcgcgcgtcgaccgtgaccgaggcggacgccgccgcgcag
ctgcaggcgttcctcgcgcagtacgtgtcgcccggcaagtcgccgatgtgcggcaactcg
atctgccaggatcgccgcttcatggcgcgctggatgccggaattcgagcggttcttccac
taccgcaacctggacgtcagcacgctcaaggagctgtgccgccgctggcagcccgcgatc
tacaagggttttcagaagcgcgcgatgcacacggcgctcgcggacatccacgagtcgatc
gacgagctgaagtactaccgccagcatttcctgattccggccgcgtcggcgccggcaggc
gagtccgcgccggccgcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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