KEGG T00398: Bamb

Burkholderia ambifaria AMMD: Bamb_2571

Entry

Bamb_2571 CDS T00398

Definition

isocitrate dehydrogenase (EC:1.1.1.42)

Orthology

K00031

isocitrate dehydrogenase [EC:1.1.1.42]

Organism

bam Burkholderia ambifaria AMMD

Pathway

bam00020	Citrate cycle (TCA cycle)
bam00480	Glutathione metabolism
bam01100	Metabolic pathways
bam01110	Biosynthesis of secondary metabolites
bam01120	Microbial metabolism in diverse environments
bam01210	2-Oxocarboxylic acid metabolism
bam01230	Biosynthesis of amino acids

Module

bam_M00009	Citrate cycle (TCA cycle, Krebs cycle)
bam_M00010	Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:bam00020]
Metabolism; Metabolism of other amino acids; Glutathione metabolism [PATH:bam00480]

SSDB

Motif

Pfam:

IDH

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1:complement(2830616..2832844)

AA seq 742 aa
MSTSPKIIYTLTDEAPALATYSLLPIVKAFTRSSGVAVETRDISLAGRIIAAFADVLPPE
QKGSDDLAELGQLTLKSEANIIKLPNISASVPQLKAAIAELQAQGYKLPAYPEDPTTDEE
KAVKARYDKIKGSAVNPVLREGNSDRRAPLSVKNYARKHPHKMGAWKATSKAHVAHMSEG
DFYGSEKSALIAAAGSVKIELTTTDGVKKVLKEKTAVKADEIIDASVMSRKALRSFIEAQ
IADAKAQDVLFSVHLKATMMKVSDPILFGHFVSVFYSDALTKHADVLAKLGFNPNNGIGD
LYARLKDLPADTREAIEADVKAEYAVRPRLAMVNSDKGITNLHVPSDVIVDASMPAMIRD
SGGMWGPDGELSDAKAVIPDRCYAGVYQAVIEDCKQHGAFDPVTMGSVPNVGLMAQAAEE
YGSHDKTFLIPTDGVVRVTDEAGNVLLEHAVESGDIWRMCQTKDAPVQDWVKLAVNRARA
TGAPAVFWLDPARAHDAQIIAKVERYLKDHDTNGLDIRIMTPVDATRFSLERIRAGKDTI
SVTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMAGGGMFETGAGGSAPKHVQQFVEEGFL
RWDSLGEFLALAASLEHLGHAYQNPKALVLAKTLDQATGKFLEENKSPARKVGGLDNRGS
HFYLCLYWAQALAEQTDDAALKAQFEGVAKSLADSEARILEELSAAQGTAQAIGGYYRPN
VELTSQAMRPSATLNAIVDAVA

NT seq 2229 nt +upstreamnt +downstreamnt
atgtccacttcgcccaagatcatctacaccctcaccgacgaagcgcccgcgctcgcgacc
tattcgctgctgccgatcgtcaaggccttcacgcgctcgtccggcgtcgccgtcgaaacg
cgcgacatctcgcttgccggccgcatcatcgcggcattcgccgacgtcctgccgccggag
cagaagggttccgacgatctggccgaactgggccagctcacgctgaagtcggaagcgaac
atcatcaagctgccgaacatcagcgcgtcggtgccgcagctcaaggccgcgatcgccgaa
ctgcaggcgcagggctacaagctgccggcgtatccggaagatccgacgaccgacgaagaa
aaggcggtcaaggcccgctacgacaagatcaagggcagcgcggtgaacccggtgctgcgc
gaaggcaactccgatcgccgcgcgccgctgtcggtgaagaactacgcccgcaagcacccg
cacaagatgggcgcatggaaggccacgtcgaaggcgcacgtcgcgcacatgagcgaaggc
gacttctacggcagcgaaaagtcggcgctgatcgccgcggccggcagcgtgaagatcgaa
ctcacgacgaccgacggcgtgaagaaggtgctgaaggaaaagacggccgtgaaggccgat
gaaatcatcgacgcatcggtgatgagccgcaaggcgctgcgcagcttcatcgaagcgcag
atcgccgacgcgaaggcgcaggacgtgctgttctcggtgcacctgaaggcgaccatgatg
aaggtctcggacccgatcctgttcggtcacttcgtgtcggtgttctacagcgacgcgctc
accaagcacgcggacgtgctcgcgaaactcggcttcaacccgaacaacgggatcggcgac
ctgtacgcgcgcctgaaggacctgccggccgacacgcgcgaagcgatcgaagccgacgtc
aaggctgaatacgcggtgcgcccgcgtctcgcgatggtcaactcggacaagggcatcacg
aacctgcacgtgccgagcgacgtgatcgtcgacgcatcgatgccggcgatgattcgcgac
tcgggcggcatgtggggcccggacggcgaactgtccgacgcgaaggccgtgattccggac
cgctgctacgcgggcgtctaccaggccgtgatcgaagactgcaagcagcacggcgcattc
gacccggtcacgatgggcagcgtgccgaacgtcggcctgatggcgcaggcggccgaggaa
tacggttcgcacgacaagacgttcctgatcccgaccgatggcgtcgtgcgcgtcacggac
gaagccggcaacgtgctgctcgagcacgcggtcgagtcgggcgacatctggcgcatgtgc
cagacgaaggacgcaccggtgcaggactgggtcaagctcgcggtgaaccgtgcccgcgcg
accggcgcgccggccgtgttctggctcgatccggcccgtgcgcacgacgcgcagatcatc
gcgaaggtcgaacgctatctgaaggatcacgacacgaacggcctcgacatccgcatcatg
acgccggtcgacgcgacgcgtttctcgctcgagcgcatccgcgcgggcaaggacacgatc
tcggtcacgggcaacgtgctgcgcgactacctgaccgacctgttcccgatcatggaactc
ggcaccagcgcgaagatgctgtcgatcgtgccgctgatggccggcggcgggatgttcgaa
acgggcgcgggcggctcggcaccgaagcacgtgcagcagttcgtcgaggaaggcttcctg
cgctgggattcgctcggcgaattcctcgcgctggccgcgtcgctcgaacacctcggccac
gcttaccagaacccgaaggcgctcgtgctcgcgaagacgctcgaccaggcgaccggcaag
ttcctggaggagaacaagtcgcccgcacgcaaggtcggcggcctcgacaaccgcggcagc
cacttctacctgtgcctgtactgggcgcaggcgctggccgagcagaccgatgatgccgcg
ctgaaggcgcagttcgaaggcgtcgcgaagtcgctggccgacagcgaagcgcgcatcctg
gaagaactgtcggccgcgcagggcaccgcgcaggcgatcggcggctactaccgtccgaac
gtcgagctgacgagccaggcgatgcgcccgagcgcaacgctgaacgccatcgtcgacgca
gtcgcctga

All links

Pathway (9)   
   KEGG PATHWAY (7)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-BAM (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (29)   

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