KEGG   Bifidobacterium asteroides: BAST_1454
Entry
BAST_1454         CDS       T02271                                 
Name
(GenBank) ribonuclease G
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
bast  Bifidobacterium asteroides
Pathway
bast03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bast00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BAST_1454
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bast03019]
    BAST_1454
   03009 Ribosome biogenesis [BR:bast03009]
    BAST_1454
Enzymes [BR:bast01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     BAST_1454
Messenger RNA biogenesis [BR:bast03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BAST_1454
Ribosome biogenesis [BR:bast03009]
 Prokaryotic type
  rRNA processing factors
   BAST_1454
SSDB
Motif
Pfam: RNase_E_G DnaJ_CXXCXGXG
Other DBs
NCBI-ProteinID: AFU72023
UniProt: K4IQG9
Position
complement(1852549..1855218)
AA seq 889 aa
MPEKTNNEDTQDSRSASGNGQERQVQETAGSGTRRRAGRRVVRVAGAAGADVPVKVEAEK
RKTSRRAKEEDDESEPSSTRRRRTRKSKEDQTADQSVQDHSGQDAQDDGSESKPTRTTTR
RRTRTATRRRTEEHAQEGEPDQDRQERALEAVEALTSGRSQRTGRKAQEQDERPRASRPR
PMTSLLFQEPVIPASRPEQDERQERDDEDEEVEQSSKTSRRGRSRNASEGGSRRSRRLNA
EERRAADEVERIEEDLDHEGITFVVDDDQEQDEDQQESGTRTRRRRRAKSDDEDTEKTVS
TRRRRRGHEQEKDKDDEDEAPLTRRRRRRRGSKSAEGEPEESSTRRSRKQQYIDEITDVE
GSTRLEAKKQRRRDNRRERSRQSQLVEQDFLARRENVNRLMVVREKEHHTQISVIEDDIL
VEHYVSDIQEVSTVGNIYLGRVQNVLPSMEAAFVDIGQARNGVLYAGEVNWDSTRLEGQP
RRIELAFKSGDPVLVQVTKDPIGHKGARLTSQVTLAGRFLVLVPSGGMTGVSRKLPDRER
SRLKSIVSRVAPKDMGVIIRTAAEGASEEALTKDLENLQRQWSKIEDKRKEFLHGKRPKL
LQGEPDVAIRVVRDIFNDDFAKLVVQGEGVYERVRNYLETMAPDLEEKLEHWDPAEHQGK
DVFDRWSIDSQLRKGMERQVYLPSGGSLVIDRTEAMTTIDVNTGRFIGKGKSLEETVTRC
NLEASEEIARQLRLRDIGGMIMIDYVDMVMPANRDLVLRRLVECLARDRTKHQVAEVTSL
GLVQMTRKRVGQGLVEAFSEECPTCHGRGFILHDKPTISASYADPYAVKGGDPFVKTNKH
GHGSSAKETLSTGSTPAVKAKLARIAAAAQAASDEDEAQAETADVAKES
NT seq 2670 nt   +upstreamnt  +downstreamnt
gtgcccgaaaaaacgaataatgaggatacccaggatagtaggtccgccagtgggaatggg
caggagcggcaggtccaggagaccgccggttccggtacccgtcgccgtgctggacggcgt
gtggtcagggtggccggcgcagctggtgccgacgtgcccgtgaaagtcgaggccgagaag
cgcaagacctcccgcagggccaaggaggaggacgatgagtccgagccctcctccacccgt
cgccgtcgcacccgcaagtccaaggaggatcagacggccgatcagagcgtgcaggaccac
tccggccaggatgcccaagatgatgggagcgagtccaagccaaccaggacgaccactcgt
cgtcgcaccagaactgccacccgtcgacgcaccgaggagcatgcccaggagggcgaacct
gatcaagaccgtcaggagcgtgcccttgaggctgtggaggctctgacctcaggccgcagc
cagaggaccggccggaaggcccaggagcaggatgagcgtccacgcgcatcccgtccccgt
cctatgacatccctgctcttccaggagccggtcatacccgcctcccggcctgagcaggat
gagcgccaggaacgggatgatgaggacgaggaagtcgagcaatcgtccaagacctcccgt
cgcggcaggtccaggaacgcttcggagggcggctcgcgccgttcccgcaggctcaacgcc
gaggagcgcagggccgccgacgaggtggaacgcatcgaggaggatctggatcacgagggt
atcactttcgtggtcgacgatgatcaggagcaggacgaggatcagcaggaatccggcacc
cgcacccgtcgccgtcgccgtgccaagagcgatgatgaggacactgagaagaccgtttcc
actcgtcgtcgccgtcgcgggcacgagcaggagaaagacaaggatgacgaggacgaggcc
ccgctgacccgtcgtcgtcgccgtcgcaggggctccaagtccgctgagggcgagccagag
gagtccagcacccgccgttcacgcaagcagcagtatattgacgagatcaccgacgtggag
ggctccacccgcctggaggccaagaagcagcgccgacgggacaaccgccgcgagcgctcc
cgccagtcccagctggtcgagcaggacttccttgcccgccgcgaaaacgtcaaccgtctg
atggtggtgcgcgaaaaggagcaccacacccagatctcggtcatcgaggacgacatcctg
gtcgagcactacgtctccgacatccaggaggtctccactgtcggcaacatctacctgggc
cgggtccaaaacgtccttcccagcatggaggccgcattcgtggacataggccaggcccgc
aacggtgtgctctacgccggcgaggtcaactgggactccacccgtctggagggccagcca
cgccggatcgaactggccttcaaatccggcgatcccgtgctggtccaggtcaccaaggat
cccatcggccacaagggcgcccgcctgacctcgcaggtcacgctggccggccgtttcctg
gtcctggtcccctcgggcggcatgaccggcgtcagccgcaagctgcccgaccgcgagcgt
tcccgcctcaagagcatcgtctccagggtggctcccaaggacatgggggtcatcatccgc
accgcggccgagggggccagcgaagaggccctgaccaaggacctggagaacctgcagcgt
cagtggagcaagatcgaggacaagcgcaaggagttcctgcacggcaagcgtcccaagctt
ctgcagggcgagccggacgtggccatccgcgtggtccgcgacatcttcaatgacgacttc
gccaagctggtggtccagggcgagggggtctacgagagggtccgcaattacctggagacc
atggcccccgacctggaggagaagcttgagcattgggatccggccgagcaccagggcaag
gacgtcttcgaccgttggagcatcgacagccagctgcgcaagggcatggagcgtcaggtc
tacctgccatccggcggctccctggtcatcgaccgcaccgaggccatgaccaccatcgat
gtgaacaccggccgcttcataggcaagggcaagtccctggaggagacggtgacccgttgc
aacctggaggcctccgaggagatcgcccggcagttgcgtctgcgcgacatcggcggcatg
atcatgatcgactatgtggatatggtcatgccggccaaccgcgacctggtcctgcgccgt
ctggtggagtgcctggcccgggaccgcaccaagcatcaggtggccgaggtcacctccctg
ggtctggtccagatgacccgcaagcgggtgggccaggggctggtcgaggccttctccgag
gagtgccccacctgccatggccgaggcttcatcctccacgacaagccgaccatctccgcc
tcctatgccgacccctatgcggtcaagggcggcgaccccttcgtcaagaccaacaagcat
ggtcatggctcctctgccaaggagaccctgtccaccggctcgacgcctgcagtcaaggcc
aagctggccaggatcgctgcggcggcccaggcggcatcggatgaggatgaagcccaggct
gagacggcggatgtcgccaaggagtcataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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