KEGG   Bdellovibrio bacteriovorus HD100: Bd2140
Entry
Bd2140            CDS       T00159                                 
Symbol
polC
Name
(GenBank) DNA polymerase III polC-type
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
bba  Bdellovibrio bacteriovorus HD100
Pathway
bba03030  DNA replication
bba03430  Mismatch repair
bba03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bba00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Bd2140 (polC)
   03430 Mismatch repair
    Bd2140 (polC)
   03440 Homologous recombination
    Bd2140 (polC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bba03032]
    Bd2140 (polC)
   03400 DNA repair and recombination proteins [BR:bba03400]
    Bd2140 (polC)
Enzymes [BR:bba01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Bd2140 (polC)
DNA replication proteins [BR:bba03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Bd2140 (polC)
DNA repair and recombination proteins [BR:bba03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Bd2140 (polC)
SSDB
Motif
Pfam: RNase_T RNase_H_2 DNA_pol_A_exo1 RcnB
Other DBs
NCBI-ProteinID: CAE79980
UniProt: Q6ML77
Position
2045297..2046184
AA seq 295 aa
MAFRWIGKSADGKSVTLKHLEECKLNTPPYATTSWVRDNADIVRVAAILDVETTGLNQTE
DTIIEIGIRQFLFNKNSGEVLAVTKSYSSFQDPGKPISPEIQALTGITDEMVAGKQIDWT
AVDALLNECQLIIAHNAKFDRPFIDRRSKTSPERVWACSFKQVEWSDKGFTSPKLELLNI
YHGFFTDSHRAINDVDALLYLLSLPDAETQKPYLFELISNARRPMTHVIATSAPFESKDH
LKGRGYNWDSINRFWSKIIFKDEVADETKWLEETVYCGPFGGMTRDIALVDGFKS
NT seq 888 nt   +upstreamnt  +downstreamnt
ttggcatttcgttggatcggcaaatcagcagacggtaaatcagttactctcaaacacctt
gaggagtgcaaactaaacacccccccttatgccaccacaagctgggttcgggacaatgcc
gacatcgttcgtgttgccgccatcctggatgttgaaaccacaggtctaaaccagaccgag
gacaccataatcgaaatcggtattcgccagttccttttcaacaaaaactcgggcgaagtc
ctggccgtcaccaagtcttactccagcttccaggacccgggcaaacccatcagccccgaa
attcaggccctgaccgggatcaccgatgaaatggtcgcgggcaagcagatcgactggact
gccgtggatgctcttttaaatgaatgccagttgatcatcgctcacaacgcgaagtttgac
cgcccgttcatcgatcgcagatccaaaacatcccctgaacgtgtgtgggcttgttcgttt
aaacaggttgaatggtccgacaaaggattcaccagcccaaagctggaacttttgaatatc
taccacggattctttacagattcccaccgggcgatcaacgacgtggacgctctgctttac
ttgttaagccttcctgatgctgaaacccagaagccttatctttttgaactgatcagcaat
gcccgtcgtcccatgactcatgtcattgcgacatccgcgccgtttgaatccaaagaccac
ctgaagggtcgcggctacaactgggacagcatcaatcgtttctggtccaagatcattttc
aaagacgaagtcgcggacgaaaccaaatggctggaagagaccgtgtattgtggccccttc
ggcggcatgacccgcgacattgccctggtggatgggtttaaaagttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (368)   
   KEGG ORTHOLOGY (1)   
   RefGene (365)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (382)   

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