KEGG   Bdellovibrio bacteriovorus HD100: Bd2232
Entry
Bd2232            CDS       T00159                                 
Symbol
recJ
Name
(GenBank) single-strand DNA-specific exonuclease
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bba  Bdellovibrio bacteriovorus HD100
Pathway
bba03410  Base excision repair
bba03430  Mismatch repair
bba03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bba00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Bd2232 (recJ)
   03430 Mismatch repair
    Bd2232 (recJ)
   03440 Homologous recombination
    Bd2232 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bba03400]
    Bd2232 (recJ)
DNA repair and recombination proteins [BR:bba03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     Bd2232 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Bd2232 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Bd2232 (recJ)
SSDB
Motif
Pfam: DHH RecJ_OB DHHA1
Other DBs
NCBI-ProteinID: CAE80063
UniProt: Q6MKZ4
Position
complement(2129645..2131372)
AA seq 575 aa
MNPLWTLRESENEPVIPSNVEGQWPKLITKVLAARGFAEASHVEKLLFPKLADLKDPLVL
KGMSQALERLGQAYLNKEKICIYADFDLDGTSGLALLKTGMLALGFPDVLHYQPKRLAEG
YGFHAHAVEELKKQGVSLIITVDVGITAHAAIDKANELGVDVILTDHHLPADTIPSAFVV
VNPNQGDCPSGLGYLCGAGVAFYLLRGLKRHFHDHPQLPKNNWDLKEVLDYFTIGTLTDM
VPLVDDNRVLVKHGLVKLAETKRAGLRALLEELDLTGRPLTSQDVAIRFAPKLNALSRME
SGILPIDIFLLDDPSQARDMVRQVMKNNSTRVQLQGDAEAEAQQLLQGWPHQDFVFVASR
NFHRGVLGLIATKLTQVYNKPAFVGAVGDDGMIVGSARLPQGQEACLVEAMSSAQELLSR
FGGHSAAAGFEIAETKVSTFVGKLADHFSDLREKPKPLEIFYDVEAGLSEVSEALMKWYD
FVGPFGAGFSIPLIHFTNVQVLSKRELKGGHLRLKIADADGGASAEALLFTPTPRQLDTL
TNVPGFYHVLGELQWNYFAGQKTVQILIRDLKAAT
NT seq 1728 nt   +upstreamnt  +downstreamnt
atgaatcctttgtggacgctgcgggaatctgaaaatgagccagtcatcccctcgaatgtc
gaggggcaatggccgaagctcatcacgaaggttcttgcagcccgcggttttgccgaagct
tcccatgttgagaagcttcttttcccgaagctcgctgatttgaaagatcctcttgtactt
aaggggatgtctcaagctcttgagcgcctgggtcaggcgtacctgaataaagaaaaaatc
tgcatctatgctgacttcgatctggatggaacttccggtctggcgttgctgaaaaccggc
atgctggccttgggtttccccgatgttttgcactatcagcccaaacgtctggctgaaggt
tacggcttccatgcccatgctgtggaagaactgaaaaagcaaggtgtcagtctgatcatc
actgtagacgttggtatcaccgcgcacgcggcgattgataaagccaatgaactgggtgtg
gatgttattctgaccgaccaccatttgcctgccgataccattccttctgcctttgtggtg
gtgaatcccaatcaaggcgattgtccgtcgggattgggttatctttgtggtgccggtgtt
gccttctatcttttgcgtggattgaaacgtcacttccacgatcatccacaactgcctaaa
aacaattgggatttaaaagaggtactagattactttaccattggcactctgacagacatg
gttccgctggtggatgacaaccgcgtgctggtaaaacacggcctggtgaagctggctgaa
accaagcgcgccggacttcgagcattgcttgaagaattggatctgaccggacgcccattg
accagtcaggatgtggcaattcgttttgctccaaaactgaatgcgctttcgcgcatggaa
tccggcattcttccgattgatatattcctgttggatgatccaagccaagcccgcgatatg
gttcgacaagtgatgaagaataattccacccgcgtgcagttgcagggggatgcggaagct
gaagctcaacaattacttcaaggctggcctcatcaggatttcgtctttgtggcttccaga
aatttccatcgaggcgttcttggattgatcgcgaccaagctgacccaagtctataacaaa
ccggcctttgtgggtgcggtgggtgatgatggcatgatcgtgggcagtgcccgtttgcca
caaggtcaggaagcctgcctggtggaagcgatgtcttcggcgcaggaattgctcagtcgt
ttcggaggtcactcggccgcggcgggttttgaaattgctgaaaccaaggtttccactttc
gtggggaaactagcggatcatttctcggatttgcgcgaaaagccaaaaccgcttgaaatc
ttctatgatgttgaagccgggctttccgaagtcagcgaagctctgatgaagtggtatgat
ttcgtcggtccgttcggggcggggttctcgattcctttgattcattttaccaatgttcag
gttttgtccaagcgcgagctgaagggcggtcatcttcgattgaagattgctgatgccgat
ggcggggcttccgcggaagctttgttgttcacgccgacaccgcgccagctggataccttg
acgaatgtgccagggttctaccatgttctgggtgaactgcagtggaactattttgccggg
caaaagacagttcagattcttattcgggatttaaaggcagccacatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (37)   

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