KEGG   Bifidobacterium animalis subsp. lactis BB-12: BIF_01031
Entry
BIF_01031         CDS       T01840                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
bbb  Bifidobacterium animalis subsp. lactis BB-12
Brite
KEGG Orthology (KO) [BR:bbb00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    BIF_01031
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bbb03021]
    BIF_01031
Transcription machinery [BR:bbb03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BIF_01031
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 CDC27 DprA_WH
Other DBs
NCBI-ProteinID: ADC86119
Position
complement(1271543..1273069)
AA seq 508 aa
MPKSKHTTVGRVPQDPGRYSLVAKETTSTEKAAKKKASESAHDEAAVEEKGKTTRRRASS
KASSAKKGSAGKTTKRATARKKKDAAESESTPARKTRAASKTGAKKAISKSEEIDDEDMI
GEDVIDEEDLDLDEDLDADENDDDLEDEESEDEPEPEEDDDEEPQAPKEPKEKGAFVVSD
NDEDDEALLANPGVNPKRRVVTTGATADPVKDYLKQIGRVSLLNAEQEVDLSERIEAGLY
AQHLLDTEGDTMEFRRKRELKWAAADGKKAKDHLLEANLRLVVSLAKRYTGRGMLFLDLI
QEGNLGLIRAVEKFDWKKGFKFSTYATWWIRQAITRAMADQARTIRVPVHMVEVINKLSR
VQRQMLQDLGREPTPDELARELDMPVEKVQEVQKYGREPISLHTPLGEDGDSEFGDLIED
TDAIAPSEAVAFSLLQEQFRQVLETLSPREAGVIKMRYGLEDGQPKTLDDIGRVYGVTRE
RIRQIESKTMSKLRHPSRSQTLRDFLDQ
NT seq 1527 nt   +upstreamnt  +downstreamnt
atgcccaaaagcaagcatacgacggtcggccgcgttccacaagacccagggaggtacagt
ttggtcgccaaggaaacgacgagcaccgagaaagccgcgaagaagaaggcctccgaaagc
gcccacgacgaagccgccgtcgaagagaagggcaagaccacccgtaggagggcctcctcg
aaggcttcgtcggcgaagaagggctccgccggcaagaccaccaagcgtgccacggcccgg
aagaagaaggatgccgccgagagcgagtcaacgccggcaaggaagactcgtgcggcttcg
aagaccggcgcgaagaaggccatttccaagtccgaggagatcgacgacgaggacatgatc
ggtgaggatgtgatcgacgaggaggatcttgacctcgatgaggatcttgacgccgacgag
aacgatgacgacctcgaggacgaggagtcggaggacgaacccgagccggaggaagacgac
gacgaagagccgcaggccccgaaggagcccaaggagaagggtgcgttcgtcgtcagcgac
aacgatgaggacgacgaagcccttctggcgaatccgggcgtgaatccgaagcgccgcgtg
gtaaccacgggcgcgaccgccgacccggtgaaggattatctcaagcagatcggtcgtgtg
agccttctcaatgccgaacaggaggtcgacctctccgagcgtatcgaggccggcctgtac
gcccagcatctgctcgacaccgagggcgacacgatggagttcagacgcaaacgcgaactc
aagtgggcagccgccgacggcaagaaggcgaaggaccacctgctcgaggccaatctgcga
ctcgtcgtctcgcttgccaagcgttacaccggccgcggcatgctattcctcgaccttatc
caggaaggcaatctgggtctcattcgcgccgtcgagaaattcgattggaagaaaggcttc
aagttctccacctatgccacctggtggatccgtcaggcgatcacccgcgccatggccgac
caggcccgcacgattcgtgtgccggtgcatatggtcgaggtgatcaacaaactctcgcgc
gtccagcgccagatgctgcaggatctgggccgtgagcccacgcccgacgagcttgcccgc
gagctcgacatgccggtggagaaggtgcaggaagtgcagaagtacggccgcgagccgatt
tcgttgcatacgccgctgggtgaggacggcgattccgaattcggcgatctgatcgaagac
accgatgccatcgcgccatcggaggcggtcgcattctcactgctacaggagcaattccgt
caggtgcttgaaacgctctcgccgcgtgaggcgggcgtgatcaagatgcgctatggtctc
gaggacggccagccgaagacgctcgacgacatcggccgcgtatatggcgtgacccgcgag
cgcattcgccagattgagtcgaagaccatgtcgaagttgcgtcatccgtcccgttcgcag
acgctgcgcgacttcctcgatcagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (12)   

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