KEGG   Bifidobacterium animalis subsp. lactis BLC1: BLC1_1285
Entry
BLC1_1285         CDS       T01841                                 
Name
(GenBank) metallo-beta-lactamase family protein
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
bbc  Bifidobacterium animalis subsp. lactis BLC1
Pathway
bbc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bbc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BLC1_1285
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bbc03019]
    BLC1_1285
Messenger RNA biogenesis [BR:bbc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BLC1_1285
SSDB
Motif
Pfam: RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Lactamase_B_6 SSL_N
Other DBs
NCBI-ProteinID: AEN77056
Position
complement(1539274..1541181)
AA seq 635 aa
MATQEAKTTRKRSAGKSATGTKRRSTKSAASQAKSPRTRKSTRNTSTRVRKQINVNKPLA
TSDTQDENRVAPPKYRKGSMRIVPLGGLGEIGRNMNVIEYNGHILLIDCGVLFPEEEQPG
VDLILPDFNYIKDRLDKVDALVLTHGHEDHIGGVPYLLKMRPDIPLIGSKLTLGFVEAKC
REHRIEPVMTQVEGRDKLKVGPFNLEFVSVTHSIPDALAVCVRTPAGSLIDTGDIKLDQL
PLDHRVTDLVEFGKLGEQGIDLLMMDSTNAEVPGFVKPETSIGPALDQVFATATRKIIVA
SFSSHVHRVQQVVDAAHKYGRKVVFVGRSMVRNMAIAADLGYLHLPEDTVIDVKKAKDYP
DNKLVYMCTGSQGEPMAALGRIADGNHRDITINEFDTVILASSLIPGNEHGVYKVINKLV
QLGARVVNRDNAAVHVSGHCNEGELLYMYNIVKPRNAMPIHGENRHLVANGLIAVKTGIE
PENVVLAEDGDVVDLYHGKAAIVGSVPCGYIYVDGDSVGELTDEELEKRRILGTEGFVSC
FAVVDTDAAEVVSGPKVYLNAVAEDESEFEKVRHQIVEQLRDAMMTGTKDTHKLQQIMRR
TLGGWVSRELKRKPMIVPVVADVAADMNKMESYND
NT seq 1908 nt   +upstreamnt  +downstreamnt
atggcaacacaagaagcaaagacaacgaggaaacgctccgcaggaaaatccgcaaccggc
acgaagcgccgcagcactaagtcggcggccagccaggcgaagagcccgcgcacgcgcaag
tccacccgcaatacgtccacacgggtgaggaagcagatcaacgtgaacaagccgctcgcc
acgagcgacacgcaggacgagaaccgcgtcgcaccgccgaagtaccgcaagggctcgatg
cgcatcgtgccgctcggcggtctgggtgagatcggccgcaacatgaatgtgatcgaatac
aacggccacattttgctcatcgactgcggtgtgctgttcccggaagaggagcagccgggc
gtcgacctcattctgcctgacttcaactacatcaaggaccgtctcgataaggtggatgcg
ctggtgctcacgcacggccatgaagaccacatcggcggcgtgccgtatctgctcaagatg
cgtccggacattccgctcatcggttcgaagctcacgctcggattcgtggaggcgaagtgc
agggaacaccgcatcgagccggtgatgacgcaggtcgaaggccgtgacaagctcaaggtg
ggtccgttcaacctcgaattcgtctcggtgacgcattcgattccggacgcgctcgccgtg
tgcgtgcgcacgccggccggctcgctcatcgacaccggtgacatcaaactcgaccagctg
ccgctcgaccaccgcgtcaccgatctcgtggagttcggcaagctcggcgaacagggcatc
gacctgctgatgatggattcgacgaacgccgaggttcccgggttcgtgaagccggagacc
tcgatcggcccggcactcgaccaggtgttcgccaccgcgacgcgcaagatcatcgtcgcc
agcttctcgagccacgtgcaccgcgtgcagcaggtggtggacgccgcccacaagtatggc
cgcaaagtcgtgttcgtcggccgttcgatggtgcgcaacatggccatcgccgccgatctg
ggctacctgcacctgcctgaggacacggtgatcgacgtcaagaaagccaaggactacccc
gacaacaagctcgtgtacatgtgcacgggttcgcagggtgagccgatggccgcgctcggc
cgcatcgccgacggcaaccaccgcgacatcacgatcaacgagttcgacacggtgattctc
gccagctcgctcatcccgggcaatgaacacggcgtgtacaaggtgatcaacaagctcgta
cagctcggcgcgcgcgtggtcaaccgcgacaacgcggcggtgcacgtctccggccactgc
aacgagggcgagctgttgtacatgtacaacattgtcaagccgaggaacgcgatgccgatc
cacggcgagaaccgccatctcgtggccaacggcctgatcgccgtgaagaccggcatcgag
cccgagaacgtcgtgctcgccgaggacggcgacgtcgtcgacctctaccacggcaaggcc
gccatcgtcggctccgtgccctgcggttacatctatgtggacggcgattcggtgggcgag
ctcaccgacgaggagctcgagaagcgccgcattctcggcaccgagggcttcgtgtcatgc
ttcgccgtcgtcgacacggacgcggccgaggtggtctccggaccgaaggtgtacctcaac
gccgttgctgaagacgaaagcgagttcgagaaggtgcgtcaccagatcgtcgagcagctg
cgcgacgcgatgatgacgggcacgaaagacacgcacaagctccagcagatcatgcgccgc
acgctcggcggctgggtttcgcgcgagctcaagcgcaagccgatgatcgtgccggtcgtg
gcggatgtcgccgccgacatgaacaagatggagtcgtacaacgactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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