KEGG   Berkelbacteria bacterium GW2011_GWE1_39_12: UT28_C0001G0734
Entry
UT28_C0001G0734   CDS       T03992                                 
Symbol
rluF
Name
(GenBank) pseudouridine synthase
  KO
K06182  23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
Organism
bbgw  Berkelbacteria bacterium GW2011_GWE1_39_12
Brite
KEGG Orthology (KO) [BR:bbgw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bbgw03009]
    UT28_C0001G0734 (rluF)
Enzymes [BR:bbgw01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.21  23S rRNA pseudouridine2604 synthase
     UT28_C0001G0734 (rluF)
Ribosome biogenesis [BR:bbgw03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    UT28_C0001G0734 (rluF)
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: AKM82519
UniProt: A0A0G4B3T7
Position
complement(663592..664287)
AA seq 231 aa
MTNINKFISSSGLCSRRQADRLIKEKRVFINGRIAIATDKVSDNDEVSVDKKIIPHTKPK
NIYLAFNKPLGVISTTDTTAKDNIMSYIKIPERVFPVGRLDVKSEGLILLTNDGDLTQKI
LKGKVVEKEYEVSVDKTIDETFLNKLRNGIMLEGRKTLPAKLEKLSERSFRITIVEGRKR
QVRRMCENFNLNVTKLVRIRIGKIKLDGIPVGKYIDIPSEKIYDLIGLDNK
NT seq 696 nt   +upstreamnt  +downstreamnt
atgacaaacattaataaatttatttcttcgtctggcctttgctcacgaagacaagcagat
cgtctaattaaagagaaacgagtctttattaatggtcgtattgcaattgcgacagataaa
gttagtgacaatgatgaagtatcagttgataaaaaaattatccctcacacaaaacctaaa
aatatctatttagcttttaataaaccgttaggggtgatcagcaccacagatacaaccgcc
aaagataatataatgagctatattaagattccggagcgagtctttccagttggaagatta
gacgtcaagtctgagggattaatccttttgacaaacgacggtgatttaacgcaaaaaatt
ctcaaagggaaagtagttgaaaaggaatacgaagtttcagtggataaaacaatcgatgaa
actttcttaaataaattaagaaatggcataatgttggaaggccgaaaaaccttgccggca
aagctagaaaaattaagtgaaagaagctttcgtattaccattgttgaaggtcgcaaacgc
caggtgcgtagaatgtgcgaaaatttcaacctaaatgtcaccaagctggttagaataaga
attgggaaaataaagctggatggaattcctgtcggaaaatacattgatattccttctgaa
aaaatttatgatttgattggattagataataaataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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