KEGG   Bordetella bronchiseptica 253: BN112_2021
Entry
BN112_2021        CDS       T02344                                 
Symbol
dnazX
Name
(GenBank) DNA polymerase III subunit Tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
bbh  Bordetella bronchiseptica 253
Pathway
bbh03030  DNA replication
bbh03430  Mismatch repair
bbh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bbh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BN112_2021 (dnazX)
   03430 Mismatch repair
    BN112_2021 (dnazX)
   03440 Homologous recombination
    BN112_2021 (dnazX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bbh03032]
    BN112_2021 (dnazX)
   03400 DNA repair and recombination proteins [BR:bbh03400]
    BN112_2021 (dnazX)
Enzymes [BR:bbh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BN112_2021 (dnazX)
DNA replication proteins [BR:bbh03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BN112_2021 (dnazX)
DNA repair and recombination proteins [BR:bbh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BN112_2021 (dnazX)
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 AAA RuvB_N AAA_22 AAA_16 DNA_pol3_tau_5 AAA_14 AAA_18 AAA_2 AAA_5 TsaE AAA_30 nSTAND3 AAA_19 PIF1 AAA_28 T2SSE Rad17
Other DBs
NCBI-ProteinID: CCJ53938
UniProt: A0A0C6P3A0
Position
complement(2184662..2186887)
AA seq 741 aa
MYRDPGGSHHSWLRRPFCIPAGAFARRSVNQRAVPGARNWLYNPPMTYLVLARKWRPRSF
DTLIGQDHVVRALTHALDTQRLHHAWLFTGTRGVGKTTLSRILAKSLNCENGITSKPCGQ
CRACTEIDAGRFVDYLELDAASNRGVEEMTQLLEQAVYAPGAGRFKVYMIDEVHMLTGHA
FNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPPDAIVGHLQAVLGEEQ
IGFEVPALRLIGQAAGGSMRDALSLTDQAIAYSAGNLSEEAVRGMLGTIDQRHLVRLLDA
LASGDAAGVLAVADELAVRGLSYAGALADLAVLLSRVAIEQRVRGALPQDDPLTEDITRL
AAALHPDAVQLFYSVAVHSRGELTLSPDEYAGFVMACLRMLALNGEAGPATAVQAPRADT
TPRAAAPAAAAPAETRPEPTPALAPQAAAAPRAVARSESKPQPASEPEPEPEPEPEPASR
PAATPVAATPPAVAEPEPVAAPTVQARAAEPAPVPPWEDLPEAVAAPAPAQPAAAPAPVV
ADDDGPPAWVDEAIPDEAGGGFAPEHSFTADPDDEFETLAPAPAAMPAPRAPTPRRESGG
RGRAARSRLADMSPAGWPELAARLPVTGLAAELARQSEWAGVQGDAVLLRVAVRTLAESE
SRVRLQTVLCEHFGQGLRLEIEVGVTGDGTAHAVAQIERAARQQAAEDAVAVDPFVQALV
ADFGGRVVPGSIRHVDNPPAA
NT seq 2226 nt   +upstreamnt  +downstreamnt
atgtatcgcgatccaggcggatcgcatcattcctggttgcggcgccccttttgcattccg
gcgggcgcgttcgcgcgccggtcagtgaaccagcgcgccgtgccgggcgcgcgcaactgg
ctctacaatccgcccatgacttatctggtactggcccgcaagtggcgcccgcgatccttc
gataccctgatcgggcaggatcacgtggtgcgcgccctcacgcacgcgctggacacgcag
cgcctgcatcatgcctggctgttcaccggtacgcgcggggtcggcaagaccaccctgtcg
cgcatcctggccaagtcgctcaattgcgagaacggcatcacgtccaagccttgcggccaa
tgccgcgcctgcaccgaaatcgatgcgggccgcttcgtcgactacctcgagctcgatgcc
gcctccaaccgcggcgtcgaggaaatgacccagctgctcgagcaggcggtctacgcgccg
ggggccggccgcttcaaggtctacatgatcgacgaagtgcacatgctgaccgggcatgcc
ttcaacgccatgctcaagacgctggaagagccgccgccgcacgtcaagttcatcctggcg
accaccgacccgcagaaaatcccggtcacggtgttgtcgcgctgcctgcagttcaatctc
aagcagatgccgcccgatgcgatcgtggggcatctgcaggcggtgctgggcgaagagcag
atcggcttcgaagtgccggcgctgcgcctgatcggccaggcggccggcggttccatgcgc
gacgcgctgtcgctgaccgaccaggccattgcctatagcgccggcaacctcagcgaagaa
gcggtgcgcggcatgctgggcacgatcgaccagcgccatctggtacgcctgctggatgcg
ctggcctcgggcgacgccgccggggtgctggcggtggccgatgagctggcggtgcgcggc
ctgtcgtatgccggcgcgctggccgacctggcggtgctgttgtcgcgggtggccatcgag
cagcgcgtgcgcggcgccttgccgcaggacgatccgctgaccgaggacattacgcgcctg
gccgccgccctgcatcccgatgcggtgcagctgttctattcggtggccgtgcatagccgt
ggcgagctgacgctgtcgcccgacgagtacgccggtttcgtgatggcctgcctgcgcatg
ctggcgctcaatggcgaggccggcccggcaacggccgtgcaggcgccgcgcgccgacacg
acgccgcgggccgcggcgcccgccgcggcggcgccggccgaaacccggcccgaaccaacg
cctgcgcttgcgccgcaggccgccgcggccccgcgcgccgtagcccgatccgaatcaaag
ccgcagcccgcgtccgagcctgaacccgagcctgaacccgagcctgagccagcgtcccgg
cccgcggccacgccggttgcggcgacgccgccggctgtcgccgaacccgaacccgtggcg
gcgccgacggtccaggcccgcgccgccgagcccgcgccagtgccgccctgggaggacctg
cccgaggccgtggccgcccccgcgccggcccagcccgcggccgcgccggcgccggtcgtg
gcggacgacgacggtccgccggcctgggtcgacgaggccattcccgacgaggctggcggc
ggcttcgcgcccgagcacagcttcaccgccgatccggacgacgaattcgaaacgctggcg
cccgcgcccgcggccatgccggcgccacgggcgccgacgccacgccgcgaatccggcggc
cgtggccgcgcggcgcggtcgcgccttgcggacatgtcgccggccggctggcccgagctg
gctgcgcgcttgccggtcaccggccttgccgccgaactggcgcgccagagcgagtgggcc
ggcgtgcagggcgacgcggtgttgttgcgcgtggccgtgcgcacgctggccgaaagcgaa
agccgcgtgcgcctgcagactgtgctgtgcgaacatttcggccagggcctgcggctggag
atcgaagttggcgtcaccggagacggcaccgcgcatgcggtggcccagatcgaacgcgcg
gcgcgccagcaggccgccgaagacgcggtggcggtcgatcccttcgtgcaggcgctggtc
gccgatttcggcggccgcgtcgtgcccggctcgatccgccatgtagacaatccgccggcc
gcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (19)   
   Pfam (19)   
All databases (32)   

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