KEGG   Bifidobacterium breve DSM 20213 = JCM 1192: BBBR_0033
Entry
BBBR_0033         CDS       T04525                                 
Name
(GenBank) putative transcriptional regulator
  KO
K03655  ATP-dependent DNA helicase RecG [EC:5.6.2.4]
Organism
bbrd  Bifidobacterium breve DSM 20213 = JCM 1192
Pathway
bbrd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bbrd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BBBR_0033
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bbrd03400]
    BBBR_0033
Enzymes [BR:bbrd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BBBR_0033
DNA repair and recombination proteins [BR:bbrd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     BBBR_0033
SSDB
Motif
Pfam: SLFN_AlbA_2 HATPase_c_4 MarR_2 AbiEi_4 HTH_27 TrmB HTH_24 FaeA HTH_IclR
Other DBs
NCBI-ProteinID: BAQ99071
Position
45823..47472
AA seq 549 aa
MLPAKESLTVEFKSEQKRPQSHDEIVDNVVALANTEGGILYLGIEDDGTVTGVCDEHRNI
NGLAALIFNKTVPQLPARVALLYENEVPIVSIEVGNSQQIVSTSQGKTLQRRLKADGSPE
VVPLFVSQFISRLSQQRFYDFSAQPAPEARLDDLNPDSRNKLRSHIRSANAQNSLLSFTD
EDFDRALELVVDGPYGLQPSVAGLLTIGSVDAIHRSIPAASAVFQVMKGMSPKVNMDPFV
LPLVDMFDRVGELMEPWNPSHEVMSGLIRVDLPDFDRGAFREAMINAFCHRDYARMGSVR
FLVDDDGLTIANPGGFIEGVSEDNLLTAQPRSRNPQLALILKAAGYVERTGRGVDTIYAG
SIAAGGSFPDYSQSSAEEVILFLRRVVPDEAFVTMIGDEERRRGAPLPVWSLIVLSLLRE
HRRLTMVQLCDFSHLEHRRIVSAVENLVEAGLVEGVGSGSSRSYMLSAQVYKRSEGLASY
VRQRDIDATRRSGLVLEFAEKNDGVVTTADVMDLFGLSYISAYRLLKKLEDVGKLRREGN
GPSSRYVLG
NT seq 1650 nt   +upstreamnt  +downstreamnt
atgttgccggctaaagaaagtttgacagttgagttcaagagcgagcagaagcgccctcaa
tcgcatgatgaaattgttgacaacgtagtggctctagccaataccgaaggcggcatactg
tatctcggtattgaagacgatggcactgtgaccggcgtatgtgacgagcatcgcaatatc
aatggacttgcggcactaattttcaataagactgttccgcagcttcccgctcgcgtggcg
ctcttgtacgagaacgaggtgccgatagtcagtattgaggtgggtaacagtcagcaaatc
gtgtctactagtcaggggaagacactacagcgccggctgaaagcagacggctcgcctgag
gtcgttccgctgtttgtttcccaattcattagccgtttatctcagcaacggttctacgat
ttcagtgcgcaacctgccccagaggctcggttggacgatttgaatccagactcacggaac
aagttgagaagccatattcgcagtgccaatgcgcaaaactcgttgttgtcttttacggat
gaggatttcgatcgggcacttgagctggttgttgatggcccgtatggattgcagccatct
gttgctggtctgctcaccattggttcggttgatgctattcatcgatcgattccagccgca
tcggctgtttttcaagtgatgaaaggcatgtctccaaaggtcaatatggatccgttcgtg
ttgcccttggtggatatgtttgatcgtgtaggcgagctgatggagccgtggaatcccagc
cacgaagtcatgagcggcttgattcgtgtcgatctgccagacttcgatcgaggggcattc
cgtgaggcaatgattaacgctttctgccatcgcgattatgcacgaatgggttcggtgagg
ttcctggttgatgatgatgggttgaccatagctaatcccggaggattcatagagggtgtc
tccgaagataacctgcttactgcacaaccgcgttcccgtaatccgcagcttgctctgatt
ttgaaagctgccggatatgttgaacgtaccgggcgaggtgtggataccatctatgccggg
tcgattgcggcaggcggttctttcccggattactcgcagtccagtgccgaagaagtcatt
ctgttcctccgccgtgtggtgcctgacgaggcattcgtgaccatgattggagatgaggag
cgtcgacgaggagcaccgttgccagtctggtcgctgattgtgctctcactactgcgcgag
catcgtaggcttactatggtccagttgtgcgatttctcccatttggagcatcgacgcatc
gtgtctgctgttgagaatttggtggaagctggtttggtagagggggtcggcagtgggagc
tctcgctcgtatatgctgagtgcccaagtgtacaaacgttcagaggggttggcgtcttac
gtgcgtcagcgtgacatcgatgccacccggcgcagtggccttgttctggagttcgccgaa
aaaaatgatggtgtcgtcactacggcggatgtcatggatctattcggcctgagctatatc
agtgcataccggttgttgaagaagctcgaagatgtgggcaagttgcgccgcgaggggaat
gggccgtcatcccgatacgtgttgggatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system