KEGG   Bifidobacterium breve DSM 20213 = JCM 1192: BBBR_0758
Entry
BBBR_0758         CDS       T04525                                 
Name
(GenBank) putative exonuclease
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
bbrd  Bifidobacterium breve DSM 20213 = JCM 1192
Brite
KEGG Orthology (KO) [BR:bbrd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bbrd03016]
    BBBR_0758
Enzymes [BR:bbrd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     BBBR_0758
Transfer RNA biogenesis [BR:bbrd03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    BBBR_0758
SSDB
Motif
Pfam: DNA_pol_A_exo1 DNA_pol_A_exoN HRDC
Other DBs
NCBI-ProteinID: BAQ99796
UniProt: D4BNW5
Position
918864..920165
AA seq 433 aa
MSDVHDTEPRLLKEPRGGVPDVTSTIEGYHHVCEALADASGSLAADAERASGFRYGHEDW
LIQCKREGAGIALLDPIALTQSGADWNEFNEAVGDATWILHDSLMDLPGFADLGLQPKAL
FDTEIAARLLGLHRFGLAAVTEHYLGITLAKEHSAADWSYRPLPRDWRNYAALDVEVLIE
LENLMRRDLRAAGKDEWAEEEFTHALSEGLAPRKPHPVPWLRISRITQLSRDPQGLAIAK
SLWQERDKLARQHDIAPSLLLSDSSIIEAATRKPHNAAQFRALRSLNERVRIRTGTEQDK
MFERYAPIQRAVKPKVWKEAIDRAMALRPSQWPSMPAPAPDENGIVNAPRSMRLWQQRHP
DRYDRLQRVRRVITSIAEDTRTPAEMIIKPQILRNLCWVENPAEVDVEEFLIAQGARNWQ
VKLIAPSVSGVIM
NT seq 1302 nt   +upstreamnt  +downstreamnt
ttgagtgacgtccatgacaccgaaccacggttactgaaagagccgcgcgggggagtgccg
gatgttacctcgacgattgaaggctatcatcacgtctgcgaagcgttggctgatgcttct
ggctccttggccgccgatgccgaacgcgcatctggattccgttatggccacgaggattgg
ctgattcaatgcaaacgagaaggtgcgggcatcgcattgctcgaccccatcgccttgacc
caatctggtgccgactggaacgaattcaatgaggccgtgggcgatgccacttggattttg
catgattccctgatggatttgccgggattcgctgatctgggacttcagccgaaggcgctg
ttcgacacggagatcgccgcgcgtctgctcggtttgcatcgattcggattagccgccgtc
accgaacattatcttggcatcactttggccaaggaacattctgcggctgactggtcctac
cgcccgctgccacgagactggcgcaactatgcggcgcttgacgtggaagtgctgatcgag
ctcgaaaacctgatgcgccgcgatctgagagccgccggcaaggacgagtgggctgaagag
gaatttacccatgcactgtccgaaggactcgcccctcgcaaaccccatccggttccgtgg
ctgcgcatttcccgcatcacccagctgagccgtgatccgcagggattggccatcgccaag
tctctgtggcaggagcgggacaaactggcccggcagcatgacattgcccccagcctgctg
ttgtctgattcctcgattatcgaggctgcgacgcgcaagccgcataatgccgcccagttt
cgggctctgcgctcgctcaatgagcgtgtgcgcattcgcaccggcaccgagcaagacaag
atgtttgaacgttatgccccaatccagcgtgccgtcaaacccaaggtttggaaagaggcc
attgatcgggccatggcgctgcgcccctcccaatggccgagtatgccggcacccgcgccg
gacgagaacggcatagtgaatgcaccgcgttcgatgcgactctggcagcaaaggcacccc
gaccgatatgaccgactgcaaagggtccgtcgcgtgatcacttcgatagccgaagatacg
cgtacgccggccgagatgattatcaagccgcagattctgcgcaacctatgctgggtggag
aatccggccgaagtggacgtcgaggagttcctgatcgcgcagggcgcaagaaactggcag
gtgaaactcattgcaccgtccgtaagtggcgttattatgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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