KEGG   Bifidobacterium breve DSM 20213 = JCM 1192: BBBR_0940
Entry
BBBR_0940         CDS       T04525                                 
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
bbrd  Bifidobacterium breve DSM 20213 = JCM 1192
Pathway
bbrd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bbrd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BBBR_0940
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bbrd03400]
    BBBR_0940
DNA repair and recombination proteins [BR:bbrd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BBBR_0940
SSDB
Motif
Pfam: UvrC_RNaseH_dom UVR HHH_5 GIY-YIG HHH_2 HHH DUF1995 UPF0758_N IMS_HHH DUF4124
Other DBs
NCBI-ProteinID: BAQ99978
Position
1125326..1127743
AA seq 805 aa
MTNDIERHSPDEWRKTAAALMPESSSAGAEESAATAKVNANGAPLLGDSRDLFRPKTSDI
PAKPGVYKWRDGEGRVIYVGKAKNLRNRLTNYFQPLYLLHPRTQTMVLTARSLEWTVVAT
ELESLTLEYTWIKEFDPRFNVQFRDDKTYPYLAVSTGEQVPRVWVTRSRKRRDTRYFGPY
AKVWELRHSLDRLLRTFPVRTCTTNVFHKAQLTGRPCLLASIGKCSAPCVNQIEADEHRR
LCEQLVGVMTGRLGRPYIAQLTRDMKEASAELEFEKAARLRDQIQMLETVVQQNAVVFDQ
DVDADVFGFASDELEASVHAFYVRAGSIRGERNWSVERVEDIADTDLMADLLVQVYSDEA
GNDHPQSAAPTAPASGGENAAVLPLAGAGTRSVTGGGAATISTSREAIGSTQTLTATDAI
ARAQATRERNTRQETTGRVDLLAPIAPVPREIIVPIEPSRRAELESWLTDQRGGAVTIRV
ASRGDKKQLMDRANENANQALQRSKMSRISDMGARTQAMNDVAKALGLNQAPLRIECYDI
SNTVGGAFQVASMVVFEDAIAKKSEYRRFSIRGKDGQGAVDDLSALYETLTRRFKHGNIA
GDSGESIDAEQRAAKAEQQQEQSVSDANGTSSTTPAAITDASSFADSSEVVQQNTNRHHF
AYKPNLVVVDGGKPQVMAAAKALKDCGVDDVAVCGLAKRLEEVWVPDDDYPIILKRQSEG
MYLLQRVRDESHRFAITYHRQQRRKGALRSALDEIPGIGESYQKRLLNHFGSVKAMRMAS
VEDFEQVKGVGHAKAEALYAALHDE
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgacgaacgatatcgagcggcatagtccggacgagtggcgcaagactgcggcggcgttg
atgccggaaagctctagtgcaggagccgaagaaagcgcagctacggcgaaggtgaatgcg
aatggggcgcctttgctgggggattctcgtgatctgtttcggcctaagacttcggacatt
ccggccaagcctggtgtgtataagtggcgcgatggggaagggcgcgtcatttatgtaggc
aaggccaagaacctgcgcaataggcttaccaattatttccagccactgtatctgctgcat
ccgcgcacacagaccatggtgcttacggcacgcagtctggagtggacggttgttgccact
gagttggaatcgttgacgcttgagtacacgtggatcaaggagttcgatccgcggttcaac
gtgcagttccgcgacgacaagacctatccgtatctggcggtcagcacgggggagcaggtt
ccccgcgtgtgggtcacgcggtcgcgcaaacgccgcgatactcgttacttcggcccatac
gccaaggtgtgggagctgaggcacagcctcgatcggctgctgcgcacctttccggtacgt
acctgcaccacgaatgtatttcataaagctcagctgaccggccggccctgcctgctggcc
tctatcggcaaatgctcggctccctgcgtgaatcagattgaagcggacgaacatcgacgg
ctgtgcgaacaacttgttggcgtcatgaccggacgccttggacggccgtatatcgcgcag
ttgacccgcgacatgaaagaggccagcgccgagcttgaattcgagaaggcggcccgtctg
cgcgatcagattcagatgctggagaccgtggtgcagcagaacgccgtcgtcttcgatcag
gacgtggacgccgacgtgtttggctttgccagcgacgaattggaagcctccgtgcacgcc
ttctatgtgcgtgccggctcgattcgcggcgaacgcaactggagcgtcgaacgggtcgag
gacatcgctgatactgacttgatggcggatcttctggtgcaggtgtattcggatgaggca
gggaatgaccacccccagtcggctgcgccgacagcccctgctagcgggggcgaaaatgca
gccgtgctcccgctggcgggggctggcacgcgaagcgtgactgggggtggcgctgcaacc
atttccaccagtcgcgaagccatcggctccacgcagacccttacggccacggacgcgatt
gctcgcgcccaggccacccgcgaacgcaatacccgtcaggaaaccaccggccgcgtggat
ctgctggctcccattgcgcctgtgccgcgcgaaatcatcgtgccgatcgaaccctcccgg
cgtgcggaactcgaaagctggctgaccgaccagcgcgggggagcggtgaccattcgcgtg
gcctcccgaggcgacaagaagcagctcatggatcgcgccaacgagaacgccaaccaggcg
ttgcagcgcagcaagatgagccgtatttcggatatgggcgcacgcacccaggccatgaat
gacgtggccaaggccctgggcctgaaccaggcgccgttacgcatcgaatgctacgacatt
tcgaacaccgtgggtggcgccttccaggtggcttccatggtggtgttcgaggacgccatc
gccaagaaatccgaataccgtcgtttttccattcgcggcaaggacgggcaaggagcagtg
gacgatctctccgcgctctacgagacgctgacgcgacgtttcaagcatggtaatatcgcc
ggggattccggcgagagcatcgacgcggagcagcgcgcggccaaggctgagcaacagcag
gaacaatccgtatccgatgcaaatggcaccagcagtacgacgccggcagcaattaccgat
gcctcatcatttgccgattcgtctgaagtggtccagcagaacacgaatcgtcatcacttt
gcatacaagccgaatctcgtggtggtcgatggcggcaaaccgcaggtcatggccgcggcc
aaggctctcaaggattgcggcgtggatgatgtggccgtctgtggcttggccaaacgcctc
gaagaggtatgggtgccggatgatgactatccgatcatcctcaaacgccagtccgaaggc
atgtacctgctgcagcgcgtacgtgacgaatcgcatcgattcgcaatcacctaccatcgc
cagcagcgccgcaaaggcgcgctgcgcagtgcgctcgatgagattccgggtattggagag
agctatcagaaacggctgctcaatcatttcggttcggtcaaagccatgcgtatggccagc
gtcgaggacttcgagcaggtcaaaggtgttggccacgccaaggccgaggcgttgtatgcc
gcgttgcatgacgagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (17)   

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